Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 AC093014.1-201ENST00000548926 724 ntBASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 AL606490.9-201ENST00000603331 271 ntBASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 AC019176.2-201ENST00000611579 315 ntBASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 AC007342.8-201ENST00000623278 678 ntBASIC5.52□□□□□ -1.53
PHRF1Q9P1Y6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 MIR491-201ENST00000384877 84 ntBASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 SNORA57.3-201ENST00000411095 141 ntBASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 PRELID3BP10-201ENST00000431957 584 ntBASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 SRGNP1-201ENST00000603392 451 ntBASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHRF1Q9P1Y6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC004656.1-201ENST00000568479 4951 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 MIR200C-201ENST00000384980 68 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 SNORD96B-201ENST00000386148 79 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 KRR1P1-201ENST00000419430 803 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 PDSS1P1-201ENST00000422953 1114 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AP000907.1-201ENST00000428428 510 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 TPT1P1-201ENST00000458495 518 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AL139099.1-201ENST00000497398 403 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 PAICSP4-201ENST00000517543 1253 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 SOD1P3-201ENST00000518682 454 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 DUXAP2-201ENST00000519198 589 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AC011471.1-201ENST00000585766 187 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 AL049634.3-201ENST00000604968 457 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 NCOA4P2-201ENST00000340589 1813 ntBASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.5□□□□□ -1.53
PHRF1Q9P1Y6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 RNA5SP399-201ENST00000364003 117 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AC112206.1-201ENST00000468416 477 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 DEFB109F-201ENST00000491870 277 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 EOGT-210ENST00000615922 1931 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AC024560.2-201ENST00000507981 1497 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 AL513548.1-201ENST00000562904 1724 ntBASIC5.49□□□□□ -1.53
PHRF1Q9P1Y6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 SNORD66.1-201ENST00000391230 76 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC083863.1-201ENST00000438811 231 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC108022.1-201ENST00000493466 478 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms