Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC008115.4-201ENST00000619780 775 ntBASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 AC104820.1-201ENST00000624183 307 ntBASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 SNORA17.5-201ENST00000630429 132 ntBASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 MIR1910-201ENST00000636955 80 ntBASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 AL139254.3-201ENST00000641097 674 ntBASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.05□□□□□ -1.92
SND1-IT1Q9HBX3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL049737.1-201ENST00000413920 1403 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 DDX6P1-205ENST00000441966 1436 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 METTL21EP-201ENST00000298105 713 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 RNU1-15P-201ENST00000353977 144 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 RN7SKP160-201ENST00000363804 340 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 SNORD74.4-201ENST00000364129 80 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 RNA5SP242-201ENST00000364171 118 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 MIR513A2-201ENST00000385249 127 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 RNU1-82P-201ENST00000390851 165 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC136624.1-201ENST00000400791 413 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AP002530.1-201ENST00000405705 684 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 NPM1P4-201ENST00000414095 812 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01881-201ENST00000416103 412 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 MTND2P15-201ENST00000418575 892 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 NANOGP6-201ENST00000429190 847 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC023347.2-201ENST00000433994 462 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 HLA-N-201ENST00000437516 135 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 YWHAZP2-201ENST00000440317 728 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 RSL24D1P2-201ENST00000445584 366 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL645939.1-201ENST00000453429 797 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC098799.3-201ENST00000506095 438 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 IGKV2-36-201ENST00000519999 223 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 OR5AZ1P-201ENST00000527448 943 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL121594.4-201ENST00000556211 1196 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 MIR5699-201ENST00000578903 90 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 MIR3614-201ENST00000581261 86 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC022726.1-201ENST00000587475 207 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 SUMO2P14-201ENST00000604488 293 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC010680.4-201ENST00000605334 543 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AP001521.2-201ENST00000608772 546 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC006946.3-201ENST00000609791 756 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC010435.1-201ENST00000623353 1177 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 AC009452.1-201ENST00000640823 606 ntBASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SND1-IT1Q9HBX3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SND1-IT1Q9HBX3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms