Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MTCO1P6-201ENST00000481192 1384 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MTND4P12-201ENST00000498999 1377 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 THAP12P9-201ENST00000503971 2360 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 COX6B1P3-201ENST00000312310 260 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RPL21P132-201ENST00000331267 462 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RNU2-41P-201ENST00000410991 178 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MYL6P5-201ENST00000412707 459 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC009237.2-201ENST00000421358 284 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 NMD3P2-201ENST00000421815 761 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC093084.1-201ENST00000424233 687 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 FTLP8-201ENST00000446770 267 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RPL7P31-201ENST00000450192 724 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 PSMC1P13-201ENST00000458195 985 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC090602.1-201ENST00000469695 252 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC023424.2-201ENST00000493479 777 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC069439.1-201ENST00000494739 167 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC138409.2-202ENST00000507274 458 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RN7SKP31-201ENST00000516354 278 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 TOMM20P1-201ENST00000534518 427 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC127024.5-201ENST00000580085 462 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AP001437.1-201ENST00000608783 456 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 BX284613.1-201ENST00000452221 1641 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AP002001.2-201ENST00000529025 1469 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC114786.1-201ENST00000512892 1415 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AL355488.2-201ENST00000609909 2850 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC016745.2-201ENST00000608834 3443 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 RPS4XP5-202ENST00000449995 1334 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 HMGB3P23-201ENST00000414981 585 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC092651.1-201ENST00000426110 312 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 MTCO2P11-201ENST00000431069 680 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 HMGN1P2-201ENST00000445197 310 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC239367.2-201ENST00000447309 705 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC009963.3-201ENST00000458090 486 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms