Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 MUC2-202ENST00000613187 4845 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 ASNSP1-201ENST00000518311 1939 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AC090971.4-201ENST00000560291 1800 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 MIR129-1-201ENST00000384972 72 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RNA5SP332-201ENST00000391063 115 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 OR2X1P-201ENST00000421144 687 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AL356387.2-201ENST00000422272 243 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 NFYAP1-201ENST00000431953 972 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 NDUFA5P1-201ENST00000433858 341 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RPL5P30-201ENST00000465511 891 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RPL23AP72-201ENST00000492447 435 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 BNIP3P41-201ENST00000503774 571 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AL139395.1-201ENST00000603662 160 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 QTRT1P1-201ENST00000604344 1078 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 AL159169.2-201ENST00000610061 1269 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 BMS1P21-201ENST00000634565 365 ntBASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
RSPO3Q9BXY4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 RHOT1P2-201ENST00000366423 333 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC068538.1-201ENST00000376856 336 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC009302.1-201ENST00000417147 390 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 MFSD13B-201ENST00000420133 1290 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC013268.2-201ENST00000420753 337 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 RPS27AP7-201ENST00000422792 455 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC009480.2-201ENST00000422916 432 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 RPL18P10-201ENST00000425606 538 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 EEF1A1P1-201ENST00000447052 739 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC111000.5-201ENST00000506559 1178 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 NDUFB4P12-201ENST00000513465 390 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC010476.1-201ENST00000519111 851 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 KCTD9P6-201ENST00000522306 950 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 BNIP3P5-201ENST00000562290 498 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 SULT1C2P2-201ENST00000562517 294 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC090312.1-201ENST00000580637 348 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 AC095038.2-201ENST00000621464 1070 ntBASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.93□□□□□ -1.78
RSPO3Q9BXY4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 RN7SKP235-201ENST00000410662 305 ntBASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 IPMKP1-201ENST00000425988 855 ntBASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 AL732292.1-201ENST00000426692 226 ntBASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 CNOT7P1-201ENST00000429006 852 ntBASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 ARL2BPP10-201ENST00000446487 531 ntBASIC3.92□□□□□ -1.78
RSPO3Q9BXY4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms