Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC002504.1-201ENST00000438281 691 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC011225.1-201ENST00000457751 369 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 RPS29P22-201ENST00000472363 168 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 RPL7P6-201ENST00000480903 738 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC024451.1-201ENST00000508013 779 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 NPM1P41-201ENST00000512920 831 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 RNU6-416P-201ENST00000516265 103 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 RNU6-635P-201ENST00000516651 102 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 SNORA48.10-201ENST00000516965 160 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC009117.1-201ENST00000563948 554 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 MIR3135A-201ENST00000578460 77 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 MIR1254-2-201ENST00000579553 63 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 MIR3910-1-201ENST00000580936 111 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC010327.2-201ENST00000587647 488 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL355333.1-201ENST00000605632 279 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL022394.1-201ENST00000606979 292 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC100812.1-201ENST00000607622 580 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC098479.1-201ENST00000609225 154 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC107871.2-201ENST00000612894 502 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AP004607.9-201ENST00000618202 316 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 LINC02495-203ENST00000636704 242 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 ZNF807-201ENST00000328088 1707 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 OR4G1P-203ENST00000641984 1631 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC022150.4-201ENST00000598322 2848 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 RNU1-150P-201ENST00000362491 162 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 RN7SKP27-201ENST00000410684 333 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 ARL5AP4-201ENST00000430731 512 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL035666.1-201ENST00000446195 348 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC078785.3-201ENST00000476607 425 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 RN7SL184P-201ENST00000488308 297 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 RN7SL187P-201ENST00000495587 303 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC110794.1-201ENST00000505816 425 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MTCYBP40-201ENST00000509390 1135 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC134698.5-201ENST00000519444 336 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AP000827.1-201ENST00000527814 258 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC010547.7-201ENST00000570323 333 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MIR4436B2-201ENST00000581415 91 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MIR4505-201ENST00000582238 73 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms