Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 COX6CP8-201ENST00000522620 226 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 IGLV3-6-201ENST00000523937 250 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC027807.1-201ENST00000559921 996 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 EIF1P4-201ENST00000572664 335 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC090312.1-201ENST00000580637 348 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 MIR4307-201ENST00000582802 84 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL009028.1-201ENST00000604895 802 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RN7SL261P-201ENST00000613441 282 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC009318.4-201ENST00000620496 486 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC022400.9-201ENST00000623633 273 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL357562.1-201ENST00000624911 609 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 CRYM-AS1-204ENST00000637983 556 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC083837.1-201ENST00000565297 2994 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 Z95327.2-201ENST00000414579 1873 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 OR11H4-201ENST00000315409 1082 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RNU6-777P-201ENST00000364265 104 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RNU6-878P-201ENST00000384578 110 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RNU2-21P-201ENST00000410368 188 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC104843.2-201ENST00000427666 297 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 NANOGP6-201ENST00000429190 847 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC109583.1-201ENST00000432156 268 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RPS3AP54-201ENST00000435535 734 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC091862.1-201ENST00000438016 1100 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC002381.1-201ENST00000447049 280 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC090142.1-201ENST00000465776 462 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 NDUFA5P5-201ENST00000468361 342 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ATP5LP5-201ENST00000483050 299 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC022206.1-201ENST00000495947 347 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AP004609.2-201ENST00000532177 190 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ZNF322P1-201ENST00000568013 1209 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC137800.2-201ENST00000574375 120 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AC005332.4-201ENST00000592752 579 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 AL589743.7-201ENST00000612637 233 ntBASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRAIPQ9BWF2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC090971.4-201ENST00000560291 1800 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms