Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC007677.1-201ENST00000445757 515 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC016027.4-201ENST00000450866 277 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 HMGB1P29-201ENST00000505659 499 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC022447.3-201ENST00000506865 495 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 MTCO1P30-201ENST00000515244 580 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 RFPL4AP3-201ENST00000515267 345 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 SCARNA18.1-201ENST00000516330 83 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 RNU6-1153P-201ENST00000516760 105 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 SNORA18.6-201ENST00000516792 115 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 RPA2P3-201ENST00000533268 770 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC011445.2-201ENST00000599274 173 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 MEMO1P5-201ENST00000604810 406 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AP000942.4-201ENST00000604811 241 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC096861.1-201ENST00000616652 240 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 MIR6886-201ENST00000619864 61 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC093591.3-201ENST00000634516 308 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 MIR4302-201ENST00000638058 60 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC006210.2-201ENST00000367074 1545 ntBASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC85AQ96PX6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 Y_RNA.162-201ENST00000363683 102 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RNU6-1090P-201ENST00000364065 94 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RNA5SP242-201ENST00000364171 118 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MIR1302-11-201ENST00000408051 138 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MIR1302-9-201ENST00000408365 138 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MIR1302-10-201ENST00000408734 138 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RN7SKP229-201ENST00000410465 302 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 USP9YP27-201ENST00000418455 438 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RPS15AP30-201ENST00000420976 390 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL513174.1-201ENST00000423182 629 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MTCO1P20-201ENST00000425366 358 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL513185.2-201ENST00000425543 193 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 DPY19L1P2-201ENST00000426647 915 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL513175.1-201ENST00000431492 780 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MRPS21P3-201ENST00000436696 262 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 PSMC1P13-201ENST00000458195 985 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC018710.1-201ENST00000506509 158 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC007363.1-201ENST00000604736 620 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC010200.2-201ENST00000605098 235 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RPL12P48-201ENST00000605620 304 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 MIR1302-2-201ENST00000607096 138 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL445264.1-201ENST00000621719 171 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms