Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR8X1P-201ENST00000534542 869 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 SULT1C2P2-201ENST00000562517 294 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC084783.1-201ENST00000565846 910 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 MIR4330-201ENST00000579077 105 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC008782.1-201ENST00000603386 430 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 Z98200.1-201ENST00000607298 470 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC007620.3-201ENST00000608131 497 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AP000346.3-201ENST00000622821 210 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC002044.3-201ENST00000623314 541 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL21A1Q96P44 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL21A1Q96P44 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 AC010132.2-201ENST00000295493 1043 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 RNA5SP307-201ENST00000362863 116 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 MIR129-1-201ENST00000384972 72 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 RPL7AP25-201ENST00000423357 805 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 AP001324.1-201ENST00000428553 399 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 RPL23AP1-201ENST00000428990 471 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 BX119904.1-201ENST00000432026 348 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 CEACAMP9-201ENST00000442990 513 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 TXNP2-201ENST00000443918 295 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 MTND2P28-201ENST00000457540 1044 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 RPS27AP17-201ENST00000463344 455 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 PARP4P3-201ENST00000510265 317 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 RNA5SP497-201ENST00000516081 97 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 OR5M7P-201ENST00000526140 972 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 FAM60CP-201ENST00000591086 664 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 RPL12P25-202ENST00000598100 674 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 AL031666.3-201ENST00000609320 1006 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 AC117490.2-201ENST00000610042 594 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 AC006065.6-201ENST00000625201 545 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 OR2L1P-202ENST00000641567 1023 ntBASIC4.14□□□□□ -1.75
COL21A1Q96P44 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL21A1Q96P44 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL21A1Q96P44 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 RAD17P1-201ENST00000418130 2042 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 RPS20P14-201ENST00000412545 360 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 ARAFP1-201ENST00000422172 605 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 RPEP3-201ENST00000425462 676 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 CNOT7P1-201ENST00000429006 852 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 NANOGP6-201ENST00000429190 847 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 FCF1P7-201ENST00000451185 558 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC133473.1-201ENST00000455173 299 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 RPL31P53-201ENST00000457065 348 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 CCDC75P1-201ENST00000469247 791 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 IGHV3-63-201ENST00000518422 341 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms