Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RN7SKP34-201ENST00000516142 244 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 IGLVIV-65-201ENST00000517313 360 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC007599.1-201ENST00000568688 1174 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC068020.1-201ENST00000594215 661 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC025946.2-201ENST00000603398 234 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AL139286.1-201ENST00000604465 483 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 MIR6780A-201ENST00000615089 68 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AL445363.3-201ENST00000623080 671 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC091953.3-201ENST00000623220 236 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC002044.3-201ENST00000623314 541 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC090017.1-201ENST00000548612 1779 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC025031.4-201ENST00000621248 3271 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC42Q96M95 IQCB2P-201ENST00000401788 1633 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC42Q96M95 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC42Q96M95 MARK2P15-201ENST00000432204 2186 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC42Q96M95 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC42Q96M95 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 RN7SKP269-201ENST00000365545 319 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 RNA5SP36-201ENST00000410197 133 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 RN7SKP235-201ENST00000410662 305 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 PGBD4P8-201ENST00000412993 562 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 VDAC1P6-201ENST00000430062 855 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 MTCO1P54-201ENST00000430139 712 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 RPSAP41-201ENST00000439695 860 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 EEF1A1P1-201ENST00000447052 739 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 HMGB3P22-202ENST00000451823 572 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 PRELID3BP7-201ENST00000503606 469 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC008638.1-201ENST00000506035 866 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 AC128687.2-201ENST00000609657 566 ntBASIC4.48□□□□□ -1.69
CCDC42Q96M95 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC42Q96M95 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
CCDC42Q96M95 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC42Q96M95 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC42Q96M95 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC42Q96M95 RNU1-14P-201ENST00000362759 152 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC42Q96M95 SEPT7P2-202ENST00000398921 823 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 MFSD13B-201ENST00000420133 1290 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AL590762.4-201ENST00000425885 253 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 RPS27AP16-201ENST00000492222 470 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC090515.3-201ENST00000560431 315 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC104662.1-201ENST00000604448 511 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC067838.1-201ENST00000606064 577 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC211433.2-201ENST00000608433 387 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC004948.1-201ENST00000609858 672 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AP000894.4-201ENST00000610185 483 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AL161616.1-201ENST00000611867 286 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AC015722.2-201ENST00000622210 551 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AL773545.4-201ENST00000637262 310 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 AL513478.4-201ENST00000641636 310 ntBASIC4.47□□□□□ -1.69
CCDC42Q96M95 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC42Q96M95 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
CCDC42Q96M95 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC42Q96M95 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC42Q96M95 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC42Q96M95 Z82217.1-201ENST00000625157 8149 ntBASIC4.46□□□□□ -1.69
CCDC42Q96M95 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC42Q96M95 LINC02471-203ENST00000641941 4752 ntBASIC4.46□□□□□ -1.7
CCDC42Q96M95 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC42Q96M95 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC42Q96M95 EIF2AP4-201ENST00000424793 1781 ntBASIC4.46□□□□□ -1.7
CCDC42Q96M95 MIR550A3-201ENST00000390735 95 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms