Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 RNA5SP242-201ENST00000364171 118 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 MIR600-201ENST00000385007 98 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 OR6K4P-201ENST00000423179 955 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 OR2AH1P-201ENST00000425717 928 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 GSTA7P-201ENST00000438425 448 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 GTF3AP5-201ENST00000442645 697 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC005002.1-201ENST00000447458 540 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL691482.1-201ENST00000453255 87 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL133477.1-201ENST00000457472 514 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC023141.9-201ENST00000458734 412 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 RN7SL443P-201ENST00000464331 290 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 RN7SL717P-201ENST00000478343 297 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 C1GALT1P3-201ENST00000522049 819 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC005868.1-201ENST00000536421 331 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC010198.2-201ENST00000550612 259 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 NBEAP1-201ENST00000554452 979 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC090888.1-201ENST00000561335 1141 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 NBR2-204ENST00000587322 63 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC025165.5-201ENST00000602802 578 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC011939.3-201ENST00000613686 466 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AC107075.1-201ENST00000613695 314 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 AL356274.1-201ENST00000617064 410 ntBASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4AQ8WYN0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AP001284.1-201ENST00000528393 2118 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 snoZ40.1-201ENST00000364540 72 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 BMS1P3-201ENST00000372011 932 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 NUDT19P3-201ENST00000404698 555 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 RN7SKP293-201ENST00000411389 296 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL513325.1-201ENST00000417716 1034 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 RPL7P53-201ENST00000421245 739 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL365203.2-201ENST00000423444 196 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 MTND4P20-201ENST00000424125 869 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC093655.2-201ENST00000425735 631 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC104843.2-201ENST00000427666 297 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC234064.1-201ENST00000436312 247 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 RPL7P29-201ENST00000437151 728 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 CACYBPP1-201ENST00000438592 684 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 HMGB1P48-201ENST00000446155 598 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 RBMY2TP-201ENST00000451162 947 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 MTND2P28-201ENST00000457540 1044 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC026348.1-201ENST00000462549 1053 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms