Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL353193.1-201ENST00000421444 268 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 GAPDHP34-201ENST00000432112 823 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 OR13K1P-201ENST00000444577 975 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 EEF1B2P3-201ENST00000447718 678 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 DHFRP3-201ENST00000455595 559 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC103563.5-201ENST00000455643 364 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 RNU6-420P-201ENST00000458780 107 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC007182.2-201ENST00000489251 402 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 RPL35P6-201ENST00000490024 372 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 RPL37P23-201ENST00000492641 294 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC108078.3-201ENST00000502633 489 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 KCTD9P5-201ENST00000504141 1170 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC139783.2-201ENST00000504847 1145 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC103851.1-201ENST00000506833 274 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 RNA5SP418-201ENST00000515951 117 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 SNORA19.2-201ENST00000516013 114 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC022878.1-201ENST00000530684 149 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 7SK.7-201ENST00000603504 247 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC090948.2-201ENST00000607363 564 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC103710.4-201ENST00000609301 899 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AL359091.2-201ENST00000609303 556 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC063952.1-203ENST00000634410 658 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 TPTEP1-208ENST00000636884 213 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AL136984.1-201ENST00000607611 1893 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 WBP11P1-201ENST00000562560 1931 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 AC108467.2-201ENST00000617640 1597 ntBASIC5.76□□□□□ -1.49
ATG4DQ86TL0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4DQ86TL0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 GDI2P1-201ENST00000429312 1336 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RNY3P3-201ENST00000363816 102 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 Y_RNA.202-201ENST00000364083 110 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 Y_RNA.401-201ENST00000383965 117 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RN7SKP59-201ENST00000410520 314 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC211486.3-201ENST00000412694 621 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RPL21P50-201ENST00000417698 477 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RPL37P21-201ENST00000435890 276 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 Z98949.2-201ENST00000440996 144 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 C1DP4-201ENST00000455429 424 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RN7SL221P-201ENST00000466190 281 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RN7SL714P-201ENST00000487050 298 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 RNU7-30P-201ENST00000516835 62 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 IGHV4-55-201ENST00000520889 368 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MT1CP-201ENST00000567054 174 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms