Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC087752.1-201ENST00000391360 558 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPL26P37-201ENST00000411983 438 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 BTF3P9-201ENST00000418784 283 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 VN2R3P-201ENST00000422626 1412 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPL7P44-201ENST00000424827 742 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 TIMM9P3-201ENST00000428659 274 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPL39P6-201ENST00000448289 150 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC108463.1-201ENST00000450258 347 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 USP9YP12-201ENST00000450481 570 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 HIGD1AP16-201ENST00000450986 258 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 PPIAP27-201ENST00000453800 265 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC007537.2-201ENST00000472093 511 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPS29P25-201ENST00000481709 171 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPL12P30-201ENST00000488389 499 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC025458.1-201ENST00000506046 166 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC026427.2-201ENST00000506228 536 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC108078.1-201ENST00000508073 725 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 RPL7L1P4-201ENST00000513004 707 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC130360.2-201ENST00000533477 1556 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC007151.1-201ENST00000572774 483 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AL161729.4-201ENST00000604650 476 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC116312.1-201ENST00000606841 314 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC024255.1-201ENST00000614376 102 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 AC127024.6-201ENST00000621598 424 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 AL132640.3-201ENST00000630473 177 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 OR4G11P-202ENST00000642116 1414 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 WDR95P-201ENST00000425638 1542 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 MTCO1P9-201ENST00000505577 1534 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC079097.1-201ENST00000512187 1399 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF43Q68DV7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC027575.3-201ENST00000583058 2747 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AL449283.1-201ENST00000602631 3403 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 RNU6-621P-201ENST00000364752 109 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 RNU6-877P-201ENST00000383868 107 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC010385.1-201ENST00000412374 256 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 RPS7P8-201ENST00000418311 581 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC234064.1-201ENST00000436312 247 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 GAPDHP48-201ENST00000436626 961 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 OR13K1P-201ENST00000444577 975 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 HMGB1P16-201ENST00000447155 540 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 VN1R38P-201ENST00000450265 887 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AL035407.2-201ENST00000454090 378 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC023194.2-201ENST00000465398 406 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC092757.1-201ENST00000467293 467 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC007998.1-201ENST00000474156 672 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 RPL34P33-201ENST00000486062 334 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 LARP1BP2-201ENST00000486594 519 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF43Q68DV7 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC093815.1-201ENST00000508637 280 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 FGF7P4-201ENST00000509595 295 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 Y_RNA.704-201ENST00000516851 102 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AP001893.2-201ENST00000526949 202 ntBASIC6.45□□□□□ -1.38
RNF43Q68DV7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.45□□□□□ -1.38
RNF43Q68DV7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms