Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL359643.1-201ENST00000404109 423 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PGBD4P8-201ENST00000412993 562 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC108032.1-201ENST00000416706 207 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 RAD23BP3-201ENST00000454157 1152 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC008155.2-201ENST00000464337 397 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 MTND4LP31-201ENST00000514859 294 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC008694.2-201ENST00000517591 306 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC007599.1-201ENST00000568688 1174 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 MIR634-201ENST00000385208 97 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC104849.1-201ENST00000462623 405 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PPIAP15-201ENST00000479662 484 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 CAB39P1-201ENST00000502277 460 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 UBE2CP3-201ENST00000502715 450 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 WBP1LP4-201ENST00000505043 344 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC084759.1-201ENST00000561168 290 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 MIR5187-201ENST00000583479 76 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 AC000374.1-201ENST00000434698 1745 ntBASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VPS13DQ5THJ4 HYDIN2-203ENST00000614586 13885 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 EIF1P3-201ENST00000423841 334 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 RPS27AP15-201ENST00000447672 466 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 RPL7P24-201ENST00000493052 752 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 MIMT1-201ENST00000597105 1050 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ELOCP35-201ENST00000604289 336 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC104623.2-202ENST00000623477 4002 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AL022393.1-201ENST00000625142 1677 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TMX2P1-201ENST00000436507 708 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC083863.1-201ENST00000438811 231 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC008481.1-201ENST00000463278 396 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 RPL23AP12-201ENST00000467573 473 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC068254.2-201ENST00000623938 3577 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 VDAC1P9-201ENST00000412766 841 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC004448.2-201ENST00000422360 586 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 VN1R32P-201ENST00000452234 905 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms