Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 MTND4P34-201ENST00000572715 1371 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 AP000473.2-201ENST00000602659 1537 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX6-1P78426 Y_RNA.77-201ENST00000362962 107 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RN7SKP149-201ENST00000363008 344 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RN7SKP162-201ENST00000363605 345 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RN7SKP128-201ENST00000364270 303 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RNA5SP211-201ENST00000365516 117 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RNU6-444P-201ENST00000383988 108 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RNU6-1122P-201ENST00000384449 107 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RPS3AP26-201ENST00000398259 784 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 SPTLC1P2-201ENST00000407089 121 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 MIR1284-201ENST00000408337 120 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RNU6-603P-201ENST00000411403 107 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC002524.1-201ENST00000411687 547 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 CEACAMP8-201ENST00000413902 580 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 NPM1P4-201ENST00000414095 812 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC062016.2-201ENST00000420950 676 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC099336.2-201ENST00000422457 254 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC113412.1-201ENST00000425840 504 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC092651.1-201ENST00000426110 312 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC126120.1-201ENST00000431082 470 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC010881.1-201ENST00000433830 235 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AL731534.1-201ENST00000434711 269 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AL445928.1-201ENST00000435545 222 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 MTND2P40-201ENST00000436718 841 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 THAP5P1-201ENST00000439089 262 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC099560.2-201ENST00000457554 255 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 RPL7P38-201ENST00000488396 739 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 OR2A20P-203ENST00000498397 1268 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC008629.2-201ENST00000503783 483 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 HMGB1P28-201ENST00000507778 552 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 HMGB3P13-201ENST00000511263 607 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 BX510359.5-201ENST00000515651 304 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.13□□□□□ -1.59
NKX6-1P78426 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX6-1P78426 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 SMARCE1P4-201ENST00000523647 241 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX6-1P78426 ACTR3BP3-201ENST00000565577 979 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 MIR4700-201ENST00000578311 74 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AL031985.2-201ENST00000600955 480 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AF131215.7-201ENST00000602443 707 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC018714.1-201ENST00000605028 208 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC008083.4-201ENST00000615076 444 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AL121890.2-201ENST00000617644 465 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 AC092650.2-201ENST00000619984 902 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 KYNUP3-201ENST00000574386 1341 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NKX6-1P78426 AC125336.1-201ENST00000508893 2827 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX6-1P78426 NCLP2-201ENST00000416078 1462 ntBASIC5.13□□□□□ -1.59
NKX6-1P78426 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX6-1P78426 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 CR381670.1-201ENST00000624291 1693 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC090017.1-201ENST00000548612 1779 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 GVINP1-202ENST00000531871 7271 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms