Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GAPDHP49-201ENST00000421421 961 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AL590609.2-201ENST00000421430 368 ntBASIC4.2□□□□□ -1.74
VSX2P58304 CHIAP3-201ENST00000423668 1133 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.2□□□□□ -1.74
VSX2P58304 PPIAP13-201ENST00000434706 478 ntBASIC4.2□□□□□ -1.74
VSX2P58304 RPS3AP54-201ENST00000435535 734 ntBASIC4.2□□□□□ -1.74
VSX2P58304 GEMIN8P3-201ENST00000445417 720 ntBASIC4.2□□□□□ -1.74
VSX2P58304 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.2□□□□□ -1.74
VSX2P58304 AC116533.1-201ENST00000459748 321 ntBASIC4.2□□□□□ -1.74
VSX2P58304 RPL5P30-201ENST00000465511 891 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.2□□□□□ -1.74
VSX2P58304 AC026979.1-201ENST00000492525 396 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.2□□□□□ -1.74
VSX2P58304 ATP1B1P1-201ENST00000509767 915 ntBASIC4.2□□□□□ -1.74
VSX2P58304 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.2□□□□□ -1.74
VSX2P58304 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.2□□□□□ -1.74
VSX2P58304 ATP5J2P6-201ENST00000565203 266 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.2□□□□□ -1.74
VSX2P58304 AC012557.1-201ENST00000607115 611 ntBASIC4.2□□□□□ -1.74
VSX2P58304 AP002360.3-201ENST00000607673 710 ntBASIC4.2□□□□□ -1.74
VSX2P58304 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
VSX2P58304 uc_338.13-201ENST00000618243 179 ntBASIC4.2□□□□□ -1.74
VSX2P58304 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.2□□□□□ -1.74
VSX2P58304 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.2□□□□□ -1.74
VSX2P58304 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VSX2P58304 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
VSX2P58304 AP001002.1-201ENST00000625148 1513 ntBASIC4.2□□□□□ -1.74
VSX2P58304 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VSX2P58304 SYT14P1-202ENST00000600441 1448 ntBASIC4.2□□□□□ -1.74
VSX2P58304 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VSX2P58304 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.2□□□□□ -1.74
VSX2P58304 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 KPNA2P2-201ENST00000419546 1489 ntBASIC4.19□□□□□ -1.74
VSX2P58304 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VSX2P58304 OR4K17-201ENST00000315543 1032 ntBASIC4.19□□□□□ -1.74
VSX2P58304 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VSX2P58304 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 RPL10P17-201ENST00000453852 316 ntBASIC4.19□□□□□ -1.74
VSX2P58304 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.19□□□□□ -1.74
VSX2P58304 RN7SL303P-201ENST00000469773 251 ntBASIC4.19□□□□□ -1.74
VSX2P58304 RN7SL812P-201ENST00000493791 279 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AP000926.3-201ENST00000497201 299 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC083829.1-201ENST00000503756 657 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 AC106806.2-201ENST00000509365 500 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 HMGB3P13-201ENST00000511263 607 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.19□□□□□ -1.74
VSX2P58304 DUX4L52-201ENST00000549363 777 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC084033.1-201ENST00000550830 633 ntBASIC4.19□□□□□ -1.74
VSX2P58304 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.19□□□□□ -1.74
VSX2P58304 AC079587.1-201ENST00000603846 277 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AC113403.1-201ENST00000604910 193 ntBASIC4.19□□□□□ -1.74
VSX2P58304 Z98200.1-201ENST00000607298 470 ntBASIC4.19□□□□□ -1.74
VSX2P58304 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.19□□□□□ -1.74
VSX2P58304 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.19□□□□□ -1.74
VSX2P58304 MLECP1-201ENST00000615893 709 ntBASIC4.19□□□□□ -1.74
VSX2P58304 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VSX2P58304 AC007546.2-201ENST00000623996 360 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AP003497.2-201ENST00000624220 967 ntBASIC4.19□□□□□ -1.74
VSX2P58304 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.19□□□□□ -1.74
VSX2P58304 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX2P58304 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.19□□□□□ -1.74
VSX2P58304 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VSX2P58304 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX2P58304 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VSX2P58304 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX2P58304 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX2P58304 RNU6-178P-201ENST00000384631 104 ntBASIC4.18□□□□□ -1.74
VSX2P58304 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VSX2P58304 CEACAMP8-201ENST00000413902 580 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.18□□□□□ -1.74
VSX2P58304 RCC2P2-201ENST00000422174 918 ntBASIC4.18□□□□□ -1.74
VSX2P58304 EIF4EP1-201ENST00000422311 642 ntBASIC4.18□□□□□ -1.74
VSX2P58304 PDSS1P1-201ENST00000422953 1114 ntBASIC4.18□□□□□ -1.74
VSX2P58304 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
VSX2P58304 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.18□□□□□ -1.74
VSX2P58304 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX2P58304 CDY14P-201ENST00000431260 1014 ntBASIC4.18□□□□□ -1.74
VSX2P58304 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.18□□□□□ -1.74
VSX2P58304 CDY12P-201ENST00000440679 1015 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC114495.1-201ENST00000441274 436 ntBASIC4.18□□□□□ -1.74
VSX2P58304 RPL7P33-201ENST00000444159 742 ntBASIC4.18□□□□□ -1.74
VSX2P58304 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.18□□□□□ -1.74
VSX2P58304 CDY13P-201ENST00000445813 1015 ntBASIC4.18□□□□□ -1.74
VSX2P58304 MTND4LP12-201ENST00000448237 295 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms