Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.23□□□□□ -1.41
PMS1P54277 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.23□□□□□ -1.41
PMS1P54277 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 BNIP3P30-201ENST00000601184 574 ntBASIC6.23□□□□□ -1.41
PMS1P54277 AL606834.2-201ENST00000602954 668 ntBASIC6.23□□□□□ -1.41
PMS1P54277 AC109347.2-201ENST00000610220 349 ntBASIC6.23□□□□□ -1.41
PMS1P54277 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 AC005332.6-201ENST00000613178 446 ntBASIC6.23□□□□□ -1.41
PMS1P54277 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.23□□□□□ -1.41
PMS1P54277 AC023509.5-201ENST00000617434 807 ntBASIC6.23□□□□□ -1.41
PMS1P54277 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 AC016717.3-201ENST00000624730 554 ntBASIC6.23□□□□□ -1.41
PMS1P54277 AL008636.1-201ENST00000625038 1018 ntBASIC6.23□□□□□ -1.41
PMS1P54277 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.23□□□□□ -1.41
PMS1P54277 AC073869.7-201ENST00000640874 297 ntBASIC6.23□□□□□ -1.41
PMS1P54277 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.23□□□□□ -1.41
PMS1P54277 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PMS1P54277 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.23□□□□□ -1.41
PMS1P54277 AC083899.1-201ENST00000454465 3819 ntBASIC6.23□□□□□ -1.41
PMS1P54277 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PMS1P54277 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PMS1P54277 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 AP002512.4-202ENST00000641599 4530 ntBASIC6.22□□□□□ -1.41
PMS1P54277 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PMS1P54277 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 CR383658.2-201ENST00000547576 1525 ntBASIC6.22□□□□□ -1.41
PMS1P54277 RNU6-1066P-201ENST00000363573 105 ntBASIC6.22□□□□□ -1.41
PMS1P54277 RN7SKP275-201ENST00000364626 301 ntBASIC6.22□□□□□ -1.41
PMS1P54277 RNU6-1283P-201ENST00000365314 105 ntBASIC6.22□□□□□ -1.41
PMS1P54277 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PMS1P54277 OR6C69P-201ENST00000394268 893 ntBASIC6.22□□□□□ -1.41
PMS1P54277 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 AL136131.1-201ENST00000406079 803 ntBASIC6.22□□□□□ -1.41
PMS1P54277 MIR1284-201ENST00000408337 120 ntBASIC6.22□□□□□ -1.41
PMS1P54277 RPS6P23-201ENST00000413224 722 ntBASIC6.22□□□□□ -1.41
PMS1P54277 RPL21P108-201ENST00000413857 481 ntBASIC6.22□□□□□ -1.41
PMS1P54277 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.22□□□□□ -1.41
PMS1P54277 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 FNDC3CP-201ENST00000420795 1155 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC127526.2-201ENST00000426436 775 ntBASIC6.22□□□□□ -1.41
PMS1P54277 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 AC128716.1-201ENST00000475129 166 ntBASIC6.22□□□□□ -1.41
PMS1P54277 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 RN7SL170P-201ENST00000487098 295 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC138853.1-201ENST00000503549 823 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC109471.1-201ENST00000511631 612 ntBASIC6.22□□□□□ -1.41
PMS1P54277 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 AC116347.2-201ENST00000514912 523 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 TRIM77BP-201ENST00000524985 1119 ntBASIC6.22□□□□□ -1.41
PMS1P54277 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 AC074029.1-201ENST00000552531 1044 ntBASIC6.22□□□□□ -1.41
PMS1P54277 ZNF519P3-201ENST00000557158 1032 ntBASIC6.22□□□□□ -1.41
PMS1P54277 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.22□□□□□ -1.41
PMS1P54277 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.22□□□□□ -1.41
PMS1P54277 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.22□□□□□ -1.41
PMS1P54277 AC068135.2-201ENST00000569293 1028 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC022884.3-201ENST00000579571 248 ntBASIC6.22□□□□□ -1.41
PMS1P54277 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC138932.5-201ENST00000617759 563 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC012414.7-202ENST00000622705 1090 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.22□□□□□ -1.41
PMS1P54277 AP001052.1-201ENST00000626421 99 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC244258.1-201ENST00000637553 1071 ntBASIC6.22□□□□□ -1.41
PMS1P54277 AC003973.3-201ENST00000624863 2822 ntBASIC6.22□□□□□ -1.41
PMS1P54277 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 AC007938.2-201ENST00000604666 2634 ntBASIC6.22□□□□□ -1.41
PMS1P54277 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PMS1P54277 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.21□□□□□ -1.41
PMS1P54277 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.21□□□□□ -1.41
PMS1P54277 AL079343.1-201ENST00000572358 1771 ntBASIC6.21□□□□□ -1.41
PMS1P54277 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PMS1P54277 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.21□□□□□ -1.41
PMS1P54277 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PMS1P54277 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PMS1P54277 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PMS1P54277 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PMS1P54277 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms