Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF144AP50876 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF144AP50876 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF144AP50876 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 RNU4-81P-201ENST00000363561 144 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 MIR301B-201ENST00000390813 78 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RNU6-316P-201ENST00000391027 107 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AL096800.1-201ENST00000405326 893 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 HMGB3P2-201ENST00000411913 584 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RPL37P10-201ENST00000412884 288 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AC074085.1-201ENST00000413598 418 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 MTND4LP17-201ENST00000414607 293 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 METTL15P3-201ENST00000415522 1221 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AC006548.1-201ENST00000427470 102 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF144AP50876 AC104698.1-201ENST00000435671 276 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF144AP50876 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF144AP50876 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF144AP50876 MTCO3P10-201ENST00000455912 772 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RPL30P15-201ENST00000457129 321 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AL162395.1-201ENST00000457882 422 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RPS15AP17-201ENST00000470598 390 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RPL31P50-201ENST00000471002 296 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AC079944.1-201ENST00000485426 495 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 TMEM251P1-201ENST00000503717 318 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 PABPC1P1-201ENST00000506347 591 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 MTCYBP40-201ENST00000509390 1135 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF144AP50876 RNU6-388P-201ENST00000517012 105 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RNU6-389P-201ENST00000517048 105 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 HMGB1P41-201ENST00000520234 440 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 NRBF2P4-201ENST00000520874 850 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF144AP50876 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 AC244034.2-201ENST00000562504 509 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 SNORD39.2-201ENST00000579995 76 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AP001029.3-201ENST00000588063 596 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 MIR6731-201ENST00000614863 72 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 MIR6736-201ENST00000616799 59 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 CR381572.1-201ENST00000625098 102 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 FKBP1AP4-201ENST00000631775 336 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 LPAL2-203ENST00000454031 2498 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
RNF144AP50876 AC007993.1-201ENST00000621298 2430 ntBASIC6.57□□□□□ -1.36
RNF144AP50876 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF144AP50876 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF144AP50876 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF144AP50876 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 AC005034.3-201ENST00000604845 1747 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF144AP50876 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RNF144AP50876 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
RNF144AP50876 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RNF144AP50876 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 RN7SKP107-201ENST00000364157 290 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 RNU1-24P-201ENST00000364285 165 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 RNU4-66P-201ENST00000365199 138 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 NHP2P2-201ENST00000396362 460 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF144AP50876 MIR548K-201ENST00000408406 116 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 RNA5SP177-201ENST00000410122 107 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 RPL12P10-201ENST00000413498 498 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 AC233981.1-201ENST00000423224 461 ntBASIC6.56□□□□□ -1.36
RNF144AP50876 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms