Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 AP000936.3-201ENST00000438127 255 ntBASIC4.82□□□□□ -1.64
LHX1P48742 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LHX1P48742 AL035551.1-201ENST00000446931 348 ntBASIC4.82□□□□□ -1.64
LHX1P48742 RPL7AP10-201ENST00000481016 791 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AC106806.2-201ENST00000509365 500 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AC092593.2-201ENST00000513866 913 ntBASIC4.82□□□□□ -1.64
LHX1P48742 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.82□□□□□ -1.64
LHX1P48742 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.82□□□□□ -1.64
LHX1P48742 AC093510.2-201ENST00000562820 896 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AL390726.5-202ENST00000564800 256 ntBASIC4.82□□□□□ -1.64
LHX1P48742 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.82□□□□□ -1.64
LHX1P48742 BPIFA4P-203ENST00000603168 689 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AC110792.4-201ENST00000609843 298 ntBASIC4.82□□□□□ -1.64
LHX1P48742 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.82□□□□□ -1.64
LHX1P48742 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
LHX1P48742 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 RNU6-792P-201ENST00000363490 107 ntBASIC4.81□□□□□ -1.64
LHX1P48742 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 MIR921-201ENST00000401133 56 ntBASIC4.81□□□□□ -1.64
LHX1P48742 FCF1P5-201ENST00000406490 482 ntBASIC4.81□□□□□ -1.64
LHX1P48742 RN7SKP222-201ENST00000410651 315 ntBASIC4.81□□□□□ -1.64
LHX1P48742 RPL18P10-201ENST00000425606 538 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AL160175.1-201ENST00000428124 247 ntBASIC4.81□□□□□ -1.64
LHX1P48742 UBE2V1P6-201ENST00000430840 422 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.81□□□□□ -1.64
LHX1P48742 MTND2P2-201ENST00000434633 945 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.81□□□□□ -1.64
LHX1P48742 RPL23AP43-201ENST00000446445 471 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AC012671.1-201ENST00000451912 203 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.81□□□□□ -1.64
LHX1P48742 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.81□□□□□ -1.64
LHX1P48742 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 AC013356.1-201ENST00000489027 564 ntBASIC4.81□□□□□ -1.64
LHX1P48742 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.81□□□□□ -1.64
LHX1P48742 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.81□□□□□ -1.64
LHX1P48742 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.81□□□□□ -1.64
LHX1P48742 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 CD24P2-201ENST00000565486 219 ntBASIC4.81□□□□□ -1.64
LHX1P48742 MIR4277-201ENST00000578298 84 ntBASIC4.81□□□□□ -1.64
LHX1P48742 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.81□□□□□ -1.64
LHX1P48742 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.81□□□□□ -1.64
LHX1P48742 AC008966.2-201ENST00000606157 453 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.81□□□□□ -1.64
LHX1P48742 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.81□□□□□ -1.64
LHX1P48742 AL163051.2-201ENST00000618976 735 ntBASIC4.81□□□□□ -1.64
LHX1P48742 AC006249.1-201ENST00000621223 471 ntBASIC4.81□□□□□ -1.64
LHX1P48742 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AC006065.6-201ENST00000625201 545 ntBASIC4.81□□□□□ -1.64
LHX1P48742 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LHX1P48742 AC093591.2-201ENST00000565254 3843 ntBASIC4.81□□□□□ -1.64
LHX1P48742 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX1P48742 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
LHX1P48742 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.8□□□□□ -1.64
LHX1P48742 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
LHX1P48742 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.8□□□□□ -1.64
LHX1P48742 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LHX1P48742 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
LHX1P48742 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 IGKV7-3-201ENST00000357453 298 ntBASIC4.8□□□□□ -1.64
LHX1P48742 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LHX1P48742 HMGB1P10-201ENST00000395823 563 ntBASIC4.8□□□□□ -1.64
LHX1P48742 RNU2-17P-201ENST00000410290 190 ntBASIC4.8□□□□□ -1.64
LHX1P48742 RN7SKP97-201ENST00000410966 333 ntBASIC4.8□□□□□ -1.64
LHX1P48742 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
LHX1P48742 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 RPL12P34-201ENST00000424532 479 ntBASIC4.8□□□□□ -1.64
LHX1P48742 DPY19L1P2-201ENST00000426647 915 ntBASIC4.8□□□□□ -1.64
LHX1P48742 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms