Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SEPT7P5-201ENST00000434048 306 ntBASIC4.68□□□□□ -1.66
SOX2P48431 PPIAP17-201ENST00000438507 471 ntBASIC4.68□□□□□ -1.66
SOX2P48431 ISCA1P2-201ENST00000438679 421 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 MTCYBP3-201ENST00000445588 1137 ntBASIC4.68□□□□□ -1.66
SOX2P48431 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.68□□□□□ -1.66
SOX2P48431 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 RPS27AP8-201ENST00000452665 445 ntBASIC4.68□□□□□ -1.66
SOX2P48431 RFC5P1-201ENST00000454419 874 ntBASIC4.68□□□□□ -1.66
SOX2P48431 MTND4LP3-201ENST00000468320 276 ntBASIC4.68□□□□□ -1.66
SOX2P48431 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AC022133.1-201ENST00000490961 571 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX2P48431 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.68□□□□□ -1.66
SOX2P48431 AC079395.1-201ENST00000510981 262 ntBASIC4.68□□□□□ -1.66
SOX2P48431 Y_RNA.655-201ENST00000515919 96 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC087808.1-201ENST00000520501 361 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 AC006512.2-201ENST00000543250 486 ntBASIC4.68□□□□□ -1.66
SOX2P48431 UBE2NP1-201ENST00000545592 458 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 AC040958.1-201ENST00000561102 201 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC116553.2-201ENST00000564203 463 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC114947.2-201ENST00000565748 2125 ntBASIC4.68□□□□□ -1.66
SOX2P48431 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AC009852.2-201ENST00000567898 485 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC022884.2-201ENST00000578535 580 ntBASIC4.68□□□□□ -1.66
SOX2P48431 MIR4999-201ENST00000585029 91 ntBASIC4.68□□□□□ -1.66
SOX2P48431 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AL590229.1-201ENST00000603497 542 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AP003973.1-201ENST00000604639 691 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC072039.2-201ENST00000608883 439 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AL139418.1-201ENST00000613613 177 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AP005431.1-201ENST00000618479 319 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC018926.3-201ENST00000618841 406 ntBASIC4.68□□□□□ -1.66
SOX2P48431 MIR6839-201ENST00000620425 113 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC024884.1-201ENST00000620583 399 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC129778.1-202ENST00000623812 261 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AP003400.3-201ENST00000624904 346 ntBASIC4.68□□□□□ -1.66
SOX2P48431 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 AL591379.1-207ENST00000635982 261 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.68□□□□□ -1.66
SOX2P48431 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 AL606537.1-201ENST00000607258 2011 ntBASIC4.68□□□□□ -1.66
SOX2P48431 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 ZNF542P-204ENST00000482727 1305 ntBASIC4.68□□□□□ -1.66
SOX2P48431 DCAF13P3-201ENST00000561147 1334 ntBASIC4.68□□□□□ -1.66
SOX2P48431 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 TCP11X1-202ENST00000622971 1372 ntBASIC4.67□□□□□ -1.66
SOX2P48431 CASC19-248ENST00000641674 1356 ntBASIC4.67□□□□□ -1.66
SOX2P48431 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 OR56B2P-201ENST00000317102 954 ntBASIC4.67□□□□□ -1.66
SOX2P48431 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 RN7SKP149-201ENST00000363008 344 ntBASIC4.67□□□□□ -1.66
SOX2P48431 RNU1-65P-201ENST00000363919 148 ntBASIC4.67□□□□□ -1.66
SOX2P48431 RNU6-553P-201ENST00000364047 96 ntBASIC4.67□□□□□ -1.66
SOX2P48431 Y_RNA.201-201ENST00000364052 96 ntBASIC4.67□□□□□ -1.66
SOX2P48431 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SOX2P48431 Y_RNA.436-201ENST00000384097 102 ntBASIC4.67□□□□□ -1.66
SOX2P48431 SNORA16A-201ENST00000384342 137 ntBASIC4.67□□□□□ -1.66
SOX2P48431 DBIP1-201ENST00000401435 260 ntBASIC4.67□□□□□ -1.66
SOX2P48431 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.67□□□□□ -1.66
SOX2P48431 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 RPL7P44-201ENST00000424827 742 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 AC124944.2-201ENST00000429866 1242 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC110602.1-201ENST00000437414 318 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL031663.1-201ENST00000437445 219 ntBASIC4.67□□□□□ -1.66
SOX2P48431 CBX1P4-201ENST00000439415 457 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AC073648.4-201ENST00000442655 781 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC005297.1-201ENST00000444765 862 ntBASIC4.67□□□□□ -1.66
SOX2P48431 YWHAQP9-201ENST00000445891 512 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC104306.1-201ENST00000449702 371 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms