Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PCAT14-202ENST00000627127 3935 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 TCP1P3-201ENST00000414406 1498 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 RNU6-452P-201ENST00000384406 107 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RNU6-146P-201ENST00000384602 108 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RNU4-74P-201ENST00000411280 161 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AL139128.1-201ENST00000413921 941 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 ARL2BPP3-201ENST00000421226 480 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 SFR1P2-201ENST00000421841 730 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 MTCO2P1-201ENST00000424648 477 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RPL21P43-201ENST00000425440 472 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AL512637.2-201ENST00000431287 1256 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 RPS3AP53-201ENST00000454716 778 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 MTATP6P14-201ENST00000455189 673 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 NPM1P29-201ENST00000483112 803 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RN7SL205P-201ENST00000490174 284 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 RPS4XP18-201ENST00000495480 763 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 RNU2-30P-201ENST00000516209 141 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A12P48065 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 SUMO2P14-201ENST00000604488 293 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AC025175.1-201ENST00000606482 759 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AF129408.1-201ENST00000608767 431 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AC016597.2-201ENST00000613256 341 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A12P48065 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AL445528.2-201ENST00000620582 470 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 AP001784.1-201ENST00000624107 428 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 AC009452.1-201ENST00000640823 606 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 AC126323.6-202ENST00000568092 3511 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC6A12P48065 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SLC6A12P48065 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC6A12P48065 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 AL355852.1-201ENST00000454081 1771 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A12P48065 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A12P48065 RNA5SP87-201ENST00000384155 118 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A12P48065 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A12P48065 RN7SKP247-201ENST00000411094 308 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC6A12P48065 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC6A12P48065 AC092570.3-201ENST00000420113 693 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 RPL12P34-201ENST00000424532 479 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC6A12P48065 NPM1P24-201ENST00000428039 894 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A12P48065 AC016831.4-201ENST00000438302 307 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AC006466.1-201ENST00000438721 289 ntBASIC4.51□□□□□ -1.69
SLC6A12P48065 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC6A12P48065 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC6A12P48065 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC6A12P48065 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC6A12P48065 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms