Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 HSPD1P14-201ENST00000432666 1618 ntBASIC4.17□□□□□ -1.74
CDX1P47902 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 OR10J6P-201ENST00000289731 930 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RN7SKP104-201ENST00000362605 328 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RNA5SP391-201ENST00000363456 119 ntBASIC4.17□□□□□ -1.74
CDX1P47902 SNORA16A-201ENST00000384342 137 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RNU6-171P-201ENST00000384354 107 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RNU1-149P-201ENST00000390870 161 ntBASIC4.17□□□□□ -1.74
CDX1P47902 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.17□□□□□ -1.74
CDX1P47902 RNU6-272P-201ENST00000411028 104 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC092638.1-201ENST00000411966 1275 ntBASIC4.17□□□□□ -1.74
CDX1P47902 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 ATG4AP1-201ENST00000416893 538 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 RPL30P3-201ENST00000424262 333 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AL139148.1-201ENST00000427122 680 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 FCF1P6-201ENST00000456841 595 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RNU7-140P-201ENST00000459546 60 ntBASIC4.17□□□□□ -1.74
CDX1P47902 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 AC091959.2-201ENST00000477363 321 ntBASIC4.17□□□□□ -1.74
CDX1P47902 HMGB1P38-201ENST00000490557 577 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC072052.1-201ENST00000496556 306 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC069306.1-201ENST00000507006 843 ntBASIC4.17□□□□□ -1.74
CDX1P47902 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 HMGB3P13-201ENST00000511263 607 ntBASIC4.17□□□□□ -1.74
CDX1P47902 HMGN1P9-201ENST00000515212 298 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC027308.1-201ENST00000517993 110 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 IGJP1-201ENST00000522682 475 ntBASIC4.17□□□□□ -1.74
CDX1P47902 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 AC019227.1-201ENST00000526902 510 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC022832.1-201ENST00000530718 645 ntBASIC4.17□□□□□ -1.74
CDX1P47902 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 YWHAZP1-201ENST00000556286 722 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AC016180.1-201ENST00000567945 403 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC022884.2-201ENST00000578535 580 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RBM22P1-201ENST00000578589 1214 ntBASIC4.17□□□□□ -1.74
CDX1P47902 RN7SL356P-201ENST00000582228 248 ntBASIC4.17□□□□□ -1.74
CDX1P47902 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AC069307.1-201ENST00000602820 447 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC091488.1-201ENST00000604239 660 ntBASIC4.17□□□□□ -1.74
CDX1P47902 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AC126915.2-201ENST00000610957 190 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AL121612.2-201ENST00000612261 482 ntBASIC4.17□□□□□ -1.74
CDX1P47902 SNX18P1Y-201ENST00000616231 511 ntBASIC4.17□□□□□ -1.74
CDX1P47902 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 AC022306.3-201ENST00000619930 550 ntBASIC4.17□□□□□ -1.74
CDX1P47902 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.17□□□□□ -1.74
CDX1P47902 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.17□□□□□ -1.74
CDX1P47902 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 AL121594.5-201ENST00000631724 573 ntBASIC4.17□□□□□ -1.74
CDX1P47902 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDX1P47902 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CDX1P47902 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.17□□□□□ -1.74
CDX1P47902 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CDX1P47902 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDX1P47902 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDX1P47902 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CDX1P47902 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDX1P47902 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDX1P47902 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDX1P47902 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDX1P47902 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDX1P47902 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms