Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD4P46934 MIR383-201ENST00000362257 73 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 RNU6-697P-201ENST00000363348 107 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD4P46934 SETP15-201ENST00000412724 337 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD4P46934 DYNLL1P7-201ENST00000429273 258 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 BTF3P10-201ENST00000433415 495 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 RAB9AP5-201ENST00000437794 597 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 RAB9AP2-201ENST00000443911 597 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 AL592156.1-201ENST00000508758 304 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
NEDD4P46934 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD4P46934 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD4P46934 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD4P46934 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD4P46934 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD4P46934 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD4P46934 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD4P46934 AC011477.5-201ENST00000586571 259 ntBASIC5.02□□□□□ -1.61
NEDD4P46934 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD4P46934 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NEDD4P46934 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD4P46934 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD4P46934 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD4P46934 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD4P46934 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD4P46934 LARP1BP1-201ENST00000506036 1359 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD4P46934 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD4P46934 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NEDD4P46934 RNU1-94P-201ENST00000362627 173 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 SNORA62-201ENST00000365493 153 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 AL049693.1-201ENST00000402760 611 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD4P46934 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD4P46934 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD4P46934 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD4P46934 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD4P46934 AC009963.2-201ENST00000453431 138 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 RPL23AP81-201ENST00000455252 467 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 TPRKBP1-201ENST00000456243 481 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 AC010618.1-201ENST00000469924 477 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 RNA5SP360-201ENST00000516555 118 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 RNA5SP73-201ENST00000516744 108 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 AC138701.1-201ENST00000524329 714 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD4P46934 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD4P46934 TVP23BP1-201ENST00000557500 617 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 AC027176.2-201ENST00000559166 746 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD4P46934 DPRXP4-201ENST00000578053 568 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 AL031666.3-201ENST00000609320 1006 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD4P46934 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD4P46934 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD4P46934 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD4P46934 MAPK10-320ENST00000641462 6696 ntBASIC5.01□□□□□ -1.61
NEDD4P46934 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD4P46934 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5□□□□□ -1.61
NEDD4P46934 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 RNA5SP52-201ENST00000362448 134 ntBASIC5□□□□□ -1.61
NEDD4P46934 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 RPS27AP11-201ENST00000402798 447 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5□□□□□ -1.61
NEDD4P46934 AL512504.1-201ENST00000415494 778 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5□□□□□ -1.61
NEDD4P46934 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5□□□□□ -1.61
NEDD4P46934 COX6CP17-201ENST00000421389 185 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5□□□□□ -1.61
NEDD4P46934 ARL6IP1P2-201ENST00000431356 563 ntBASIC5□□□□□ -1.61
NEDD4P46934 PRELID3BP10-201ENST00000431957 584 ntBASIC5□□□□□ -1.61
NEDD4P46934 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5□□□□□ -1.61
NEDD4P46934 AL513343.1-201ENST00000451818 792 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC105137.1-201ENST00000484355 562 ntBASIC5□□□□□ -1.61
NEDD4P46934 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5□□□□□ -1.61
NEDD4P46934 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5□□□□□ -1.61
NEDD4P46934 OR7E10P-201ENST00000526420 991 ntBASIC5□□□□□ -1.61
NEDD4P46934 PHBP17-201ENST00000528576 541 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5□□□□□ -1.61
NEDD4P46934 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5□□□□□ -1.61
NEDD4P46934 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5□□□□□ -1.61
NEDD4P46934 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5□□□□□ -1.61
NEDD4P46934 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5□□□□□ -1.61
NEDD4P46934 IPO5P1-202ENST00000600039 287 ntBASIC5□□□□□ -1.61
NEDD4P46934 AL590392.1-201ENST00000604960 446 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC003001.2-201ENST00000616294 831 ntBASIC5□□□□□ -1.61
NEDD4P46934 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 AC092435.4-201ENST00000623012 4159 ntBASIC5□□□□□ -1.61
NEDD4P46934 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms