Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 SPATA2P1-201ENST00000431223 2055 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 AC053481.2-202ENST00000582394 1500 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 RAD23BP1-201ENST00000421404 1227 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.97□□□□□ -1.77
CD40LGP29965 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 AL356535.1-201ENST00000440335 398 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AL137845.2-201ENST00000444292 988 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC073850.1-201ENST00000449243 255 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 VN1R32P-201ENST00000452234 905 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 DDX39BP2-208ENST00000453923 258 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 AC018635.1-201ENST00000468292 1030 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 RN7SL319P-201ENST00000480656 221 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC013701.1-201ENST00000522657 465 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 AL161713.1-201ENST00000555538 145 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.97□□□□□ -1.77
CD40LGP29965 ADAD1P2-201ENST00000588476 646 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC006116.3-201ENST00000592968 361 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC211433.2-201ENST00000608433 387 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.97□□□□□ -1.77
CD40LGP29965 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.97□□□□□ -1.77
CD40LGP29965 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CD40LGP29965 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.97□□□□□ -1.77
CD40LGP29965 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CD40LGP29965 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40LGP29965 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.77
CD40LGP29965 NOL8P1-201ENST00000508336 3529 ntBASIC3.96□□□□□ -1.77
CD40LGP29965 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD40LGP29965 NXPH1-205ENST00000602349 1953 ntBASIC3.96□□□□□ -1.77
CD40LGP29965 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CD40LGP29965 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CD40LGP29965 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40LGP29965 MIR765-201ENST00000390226 114 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 AL590806.1-201ENST00000415818 853 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40LGP29965 AL645608.4-201ENST00000423619 154 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 RPL30P3-201ENST00000424262 333 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.96□□□□□ -1.78
CD40LGP29965 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 PA2G4P6-201ENST00000438325 1197 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 CCRL1P1-201ENST00000449542 1053 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 RN7SL177P-201ENST00000476596 299 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC004980.4-201ENST00000513375 203 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40LGP29965 RNU4-18P-201ENST00000516751 149 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 RN7SKP147-201ENST00000517154 244 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC092851.1-201ENST00000535964 478 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 RFPL1S-203ENST00000539579 330 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC021483.2-201ENST00000567415 758 ntBASIC3.96□□□□□ -1.78
CD40LGP29965 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40LGP29965 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms