Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHC1P29353 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHC1P29353 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SHC1P29353 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHC1P29353 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHC1P29353 CASC19-261ENST00000641853 1638 ntBASIC4.21□□□□□ -1.74
SHC1P29353 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHC1P29353 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHC1P29353 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 OR10AB1P-202ENST00000641219 1686 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC017104.4-201ENST00000636283 1592 ntBASIC4.2□□□□□ -1.74
SHC1P29353 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHC1P29353 OR56B2P-201ENST00000317102 954 ntBASIC4.2□□□□□ -1.74
SHC1P29353 RNU6-650P-201ENST00000365658 111 ntBASIC4.2□□□□□ -1.74
SHC1P29353 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHC1P29353 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 RPL21P108-201ENST00000413857 481 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 AL512637.2-201ENST00000431287 1256 ntBASIC4.2□□□□□ -1.74
SHC1P29353 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 H2AFZP5-201ENST00000446960 382 ntBASIC4.2□□□□□ -1.74
SHC1P29353 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 RAB28P3-201ENST00000448325 597 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC073264.2-201ENST00000448886 166 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 RPL7AP10-201ENST00000481016 791 ntBASIC4.2□□□□□ -1.74
SHC1P29353 NAMPTP2-201ENST00000505629 1115 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC108157.1-201ENST00000510511 539 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC026407.1-201ENST00000518369 204 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.2□□□□□ -1.74
SHC1P29353 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 AC018442.3-201ENST00000523025 183 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 AC137768.1-201ENST00000549998 553 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 FAM106CP-201ENST00000582212 507 ntBASIC4.2□□□□□ -1.74
SHC1P29353 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.2□□□□□ -1.74
SHC1P29353 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 AL133247.2-201ENST00000603236 482 ntBASIC4.2□□□□□ -1.74
SHC1P29353 MTATP6P2-201ENST00000603319 678 ntBASIC4.2□□□□□ -1.74
SHC1P29353 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.2□□□□□ -1.74
SHC1P29353 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SHC1P29353 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHC1P29353 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHC1P29353 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHC1P29353 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.19□□□□□ -1.74
SHC1P29353 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHC1P29353 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 RNA5SP505-201ENST00000364748 108 ntBASIC4.19□□□□□ -1.74
SHC1P29353 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHC1P29353 RNU6-1000P-201ENST00000391066 106 ntBASIC4.19□□□□□ -1.74
SHC1P29353 MIR298-201ENST00000401212 88 ntBASIC4.19□□□□□ -1.74
SHC1P29353 AL049697.2-201ENST00000403708 294 ntBASIC4.19□□□□□ -1.74
SHC1P29353 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHC1P29353 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.19□□□□□ -1.74
SHC1P29353 AC092570.3-201ENST00000420113 693 ntBASIC4.19□□□□□ -1.74
SHC1P29353 AC069213.2-201ENST00000420238 366 ntBASIC4.19□□□□□ -1.74
SHC1P29353 Z74021.1-201ENST00000423610 407 ntBASIC4.19□□□□□ -1.74
SHC1P29353 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 RNF19BPX-201ENST00000426224 625 ntBASIC4.19□□□□□ -1.74
SHC1P29353 MTCO1P45-201ENST00000431457 267 ntBASIC4.19□□□□□ -1.74
SHC1P29353 ZNF965P-201ENST00000432501 817 ntBASIC4.19□□□□□ -1.74
SHC1P29353 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.19□□□□□ -1.74
SHC1P29353 Z99127.2-201ENST00000441426 334 ntBASIC4.19□□□□□ -1.74
SHC1P29353 AC007000.2-201ENST00000442564 487 ntBASIC4.19□□□□□ -1.74
SHC1P29353 AC104651.2-201ENST00000447549 528 ntBASIC4.19□□□□□ -1.74
SHC1P29353 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.19□□□□□ -1.74
SHC1P29353 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms