Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 AC104964.3-201ENST00000606115 2860 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC109315.1-201ENST00000584143 1347 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTPN1P18031 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTPN1P18031 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 Y_RNA.517-201ENST00000384551 106 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 TPT1P2-201ENST00000413105 503 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 NPM1P4-201ENST00000414095 812 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 PTP4A1P1-201ENST00000420539 515 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 RIMKLBP2-201ENST00000424737 654 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 RPL7P56-201ENST00000429441 717 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 CFL1P1-202ENST00000432948 411 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC092641.1-201ENST00000440229 772 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 COX6CP2-201ENST00000444980 225 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 BMI1P1-201ENST00000445879 941 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 OR52E3P-201ENST00000452083 936 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 MTCYBP1-201ENST00000454315 1119 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AZGP1P2-201ENST00000454506 345 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 MTND1P16-201ENST00000465177 898 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AL133445.1-201ENST00000467051 452 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 VPS26AP1-201ENST00000483197 979 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 CBX3P3-201ENST00000508108 532 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 BX510359.5-201ENST00000515651 304 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 SMARCE1P4-201ENST00000523647 241 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 AP002963.1-201ENST00000530590 184 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC027026.1-201ENST00000532323 742 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.85□□□□□ -1.47
PTPN1P18031 PCNPP1-201ENST00000552501 511 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.85□□□□□ -1.47
PTPN1P18031 AP005403.1-201ENST00000579720 229 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN1P18031 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 AC000068.2-201ENST00000608816 460 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 AC004948.1-201ENST00000609858 672 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 PCMTD1P7-201ENST00000634506 357 ntBASIC5.85□□□□□ -1.47
PTPN1P18031 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTPN1P18031 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN1P18031 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN1P18031 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 AL353743.4-201ENST00000422653 1547 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTPN1P18031 AL121950.1-201ENST00000624993 2077 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC005832.2-201ENST00000538921 1430 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 AL121839.2-201ENST00000565058 6943 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PTPN1P18031 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 AC003973.3-201ENST00000624863 2822 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 RNU6-500P-201ENST00000362349 107 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 SNORA16A-201ENST00000384342 137 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 AC009804.1-201ENST00000400949 179 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 RPL7P8-201ENST00000411964 730 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 RPS15AP38-201ENST00000413110 372 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 Z99497.1-201ENST00000421282 135 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 GAPDHP49-201ENST00000421421 961 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 MTND1P4-201ENST00000435196 415 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms