Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 VN1R12P-201ENST00000403778 876 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 NCSTNP1-201ENST00000406229 144 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AL450992.3-201ENST00000413192 568 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 RNF10P1-201ENST00000418589 369 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 THEM7P-201ENST00000419556 672 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 FNDC3CP-201ENST00000420795 1155 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 RPL23AP19-201ENST00000436229 369 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AL353662.1-201ENST00000439099 327 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 DNAJB5P1-201ENST00000454004 806 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 GEMIN2P1-201ENST00000454246 752 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 IGBP1P5-201ENST00000507524 1000 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 HMGB1P44-201ENST00000508597 572 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.74□□□□□ -1.49
COL6A2P12110 GTF2F2P1-201ENST00000511083 675 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 PRMT5P1-201ENST00000514351 598 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 FABP5P5-201ENST00000515537 406 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AC008802.1-201ENST00000519121 791 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC024405.1-201ENST00000532521 1042 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC234778.2-201ENST00000566241 354 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AL021918.2-201ENST00000613415 194 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 AC026368.1-201ENST00000614934 690 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 uc_338.29-201ENST00000615099 168 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 AL356266.1-201ENST00000623311 483 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 AC073488.6-201ENST00000632293 754 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL6A2P12110 CASC19-248ENST00000641674 1356 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.74□□□□□ -1.49
COL6A2P12110 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
COL6A2P12110 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 RNF6P1-201ENST00000444889 1784 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 ASNSP1-204ENST00000641977 1664 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 RNU6-249P-201ENST00000363016 102 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL6A2P12110 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL6A2P12110 MIR1284-201ENST00000408337 120 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC113412.1-201ENST00000425840 504 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 RPS27AP6-201ENST00000427962 448 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 LARP1BP3-201ENST00000437229 869 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 TUBB4BP6-201ENST00000437576 479 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.73□□□□□ -1.49
COL6A2P12110 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC010307.1-201ENST00000467206 836 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC106822.1-201ENST00000502647 526 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 BNIP3P41-201ENST00000503774 571 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.73□□□□□ -1.49
COL6A2P12110 IGHV3-32-201ENST00000519182 355 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AP001189.2-201ENST00000527320 189 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms