Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MMP3P08254 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
MMP3P08254 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
MMP3P08254 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 RNU6-249P-201ENST00000363016 102 ntBASIC5.18□□□□□ -1.58
MMP3P08254 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 RPS3AP25-201ENST00000411660 793 ntBASIC5.18□□□□□ -1.58
MMP3P08254 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 MTND2P2-201ENST00000434633 945 ntBASIC5.18□□□□□ -1.58
MMP3P08254 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 SNRPFP2-201ENST00000440710 251 ntBASIC5.18□□□□□ -1.58
MMP3P08254 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 NUTF2P7-201ENST00000453086 375 ntBASIC5.18□□□□□ -1.58
MMP3P08254 RPL23AP24-201ENST00000458203 385 ntBASIC5.18□□□□□ -1.58
MMP3P08254 SCARNA10-201ENST00000459255 330 ntBASIC5.18□□□□□ -1.58
MMP3P08254 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 AC114322.1-201ENST00000506771 926 ntBASIC5.18□□□□□ -1.58
MMP3P08254 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.18□□□□□ -1.58
MMP3P08254 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.18□□□□□ -1.58
MMP3P08254 OR8G5-201ENST00000524943 1041 ntBASIC5.18□□□□□ -1.58
MMP3P08254 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.18□□□□□ -1.58
MMP3P08254 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.18□□□□□ -1.58
MMP3P08254 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.18□□□□□ -1.58
MMP3P08254 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 CLIC4P2-201ENST00000601934 717 ntBASIC5.18□□□□□ -1.58
MMP3P08254 AC112220.2-201ENST00000605513 533 ntBASIC5.18□□□□□ -1.58
MMP3P08254 AC092653.1-201ENST00000608509 531 ntBASIC5.18□□□□□ -1.58
MMP3P08254 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.18□□□□□ -1.58
MMP3P08254 AC011815.3-201ENST00000624194 473 ntBASIC5.18□□□□□ -1.58
MMP3P08254 AC011944.2-201ENST00000624440 683 ntBASIC5.18□□□□□ -1.58
MMP3P08254 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 UGT2B26P-201ENST00000508672 1613 ntBASIC5.18□□□□□ -1.58
MMP3P08254 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
MMP3P08254 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
MMP3P08254 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MMP3P08254 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MMP3P08254 CDC27P2-201ENST00000425026 1922 ntBASIC5.17□□□□□ -1.58
MMP3P08254 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 RNU6-468P-201ENST00000384003 109 ntBASIC5.17□□□□□ -1.58
MMP3P08254 EI24P3-201ENST00000399046 1062 ntBASIC5.17□□□□□ -1.58
MMP3P08254 U3.35-201ENST00000408405 208 ntBASIC5.17□□□□□ -1.58
MMP3P08254 SNORA79B-201ENST00000410557 148 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC002524.1-201ENST00000411687 547 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
MMP3P08254 XKRYP4-201ENST00000414395 483 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 AL356387.2-201ENST00000422272 243 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC241520.1-201ENST00000422654 1099 ntBASIC5.17□□□□□ -1.58
MMP3P08254 RPL7P57-201ENST00000423238 740 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC004975.1-201ENST00000428733 208 ntBASIC5.17□□□□□ -1.58
MMP3P08254 MTCYBP29-201ENST00000436327 1006 ntBASIC5.17□□□□□ -1.58
MMP3P08254 NPM1P33-201ENST00000438918 872 ntBASIC5.17□□□□□ -1.58
MMP3P08254 FHP1-201ENST00000442741 703 ntBASIC5.17□□□□□ -1.58
MMP3P08254 RPL7P33-201ENST00000444159 742 ntBASIC5.17□□□□□ -1.58
MMP3P08254 XKRYP5-201ENST00000449659 483 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 AC010618.1-201ENST00000469924 477 ntBASIC5.17□□□□□ -1.58
MMP3P08254 RPL21P126-201ENST00000470049 478 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC098583.1-201ENST00000480875 255 ntBASIC5.17□□□□□ -1.58
MMP3P08254 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 AC015795.1-201ENST00000513669 327 ntBASIC5.17□□□□□ -1.58
MMP3P08254 RNA5SP464-201ENST00000516251 108 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.17□□□□□ -1.58
MMP3P08254 AC118942.1-201ENST00000529674 1035 ntBASIC5.17□□□□□ -1.58
MMP3P08254 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.17□□□□□ -1.58
MMP3P08254 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 MTATP6P24-201ENST00000576835 677 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
MMP3P08254 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms