Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
APOEP02649 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOEP02649 AC067945.1-201ENST00000342609 618 ntBASIC4.54□□□□□ -1.68
APOEP02649 RNU6-178P-201ENST00000384631 104 ntBASIC4.54□□□□□ -1.68
APOEP02649 VN1R8P-201ENST00000407739 893 ntBASIC4.54□□□□□ -1.68
APOEP02649 SNORA11F-201ENST00000408237 128 ntBASIC4.54□□□□□ -1.68
APOEP02649 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.54□□□□□ -1.68
APOEP02649 RN7SL303P-201ENST00000469773 251 ntBASIC4.54□□□□□ -1.68
APOEP02649 RPL23AP2-201ENST00000471227 466 ntBASIC4.54□□□□□ -1.68
APOEP02649 RN7SL809P-201ENST00000482040 297 ntBASIC4.54□□□□□ -1.68
APOEP02649 RPS27AP16-201ENST00000492222 470 ntBASIC4.54□□□□□ -1.68
APOEP02649 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
APOEP02649 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.54□□□□□ -1.68
APOEP02649 AC025674.1-201ENST00000507074 324 ntBASIC4.54□□□□□ -1.68
APOEP02649 HPRT1P1-201ENST00000509498 657 ntBASIC4.54□□□□□ -1.68
APOEP02649 MTND2P17-201ENST00000550281 688 ntBASIC4.54□□□□□ -1.68
APOEP02649 AC090515.3-201ENST00000560431 315 ntBASIC4.54□□□□□ -1.68
APOEP02649 AC105036.1-201ENST00000566222 271 ntBASIC4.54□□□□□ -1.68
APOEP02649 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.54□□□□□ -1.68
APOEP02649 ELOCP28-201ENST00000590044 317 ntBASIC4.54□□□□□ -1.68
APOEP02649 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.54□□□□□ -1.68
APOEP02649 MIR378J-201ENST00000611988 109 ntBASIC4.54□□□□□ -1.68
APOEP02649 AL669942.2-201ENST00000620352 697 ntBASIC4.54□□□□□ -1.68
APOEP02649 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.54□□□□□ -1.68
APOEP02649 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.54□□□□□ -1.68
APOEP02649 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOEP02649 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
APOEP02649 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOEP02649 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOEP02649 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
APOEP02649 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
APOEP02649 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.68
APOEP02649 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
APOEP02649 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
APOEP02649 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
APOEP02649 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
APOEP02649 RNA5SP175-201ENST00000364275 119 ntBASIC4.53□□□□□ -1.68
APOEP02649 RNA5SP513-201ENST00000364648 118 ntBASIC4.53□□□□□ -1.68
APOEP02649 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 AL589994.1-201ENST00000404962 340 ntBASIC4.53□□□□□ -1.68
APOEP02649 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 C4BPAP2-201ENST00000428434 478 ntBASIC4.53□□□□□ -1.68
APOEP02649 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 RPS3AP54-201ENST00000435535 734 ntBASIC4.53□□□□□ -1.68
APOEP02649 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 RPL10P17-201ENST00000453852 316 ntBASIC4.53□□□□□ -1.68
APOEP02649 PRELID3BP7-201ENST00000503606 469 ntBASIC4.53□□□□□ -1.68
APOEP02649 AC010374.1-201ENST00000503762 1237 ntBASIC4.53□□□□□ -1.68
APOEP02649 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.53□□□□□ -1.68
APOEP02649 OR5BC1P-201ENST00000529327 739 ntBASIC4.53□□□□□ -1.68
APOEP02649 AP001804.2-201ENST00000533932 910 ntBASIC4.53□□□□□ -1.68
APOEP02649 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.53□□□□□ -1.68
APOEP02649 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.53□□□□□ -1.68
APOEP02649 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
APOEP02649 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
APOEP02649 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
APOEP02649 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOEP02649 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
APOEP02649 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
APOEP02649 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.69
APOEP02649 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
APOEP02649 USP9YP4-201ENST00000424401 1745 ntBASIC4.52□□□□□ -1.69
APOEP02649 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
APOEP02649 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
APOEP02649 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
APOEP02649 RNU6-1320P-201ENST00000390838 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 RNU6-1269P-201ENST00000391139 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 RAC1P3-201ENST00000416129 580 ntBASIC4.52□□□□□ -1.69
APOEP02649 AL139095.3-201ENST00000419672 1203 ntBASIC4.52□□□□□ -1.69
APOEP02649 EIF1P3-201ENST00000423841 334 ntBASIC4.52□□□□□ -1.69
APOEP02649 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
APOEP02649 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
APOEP02649 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 MAPRE1P3-201ENST00000435438 796 ntBASIC4.52□□□□□ -1.69
APOEP02649 ACTR3P2-201ENST00000439585 1257 ntBASIC4.52□□□□□ -1.69
APOEP02649 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 RNU6-599P-201ENST00000459383 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 RNU6-1193P-201ENST00000459461 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 RPL35AP15-201ENST00000468042 339 ntBASIC4.52□□□□□ -1.69
APOEP02649 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 PPBPP1-201ENST00000510807 373 ntBASIC4.52□□□□□ -1.69
APOEP02649 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 AL352979.3-201ENST00000553515 247 ntBASIC4.52□□□□□ -1.69
APOEP02649 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms