Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC092647.3-201ENST00000443044 633 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AL137845.2-201ENST00000444292 988 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AL163193.1-201ENST00000444895 788 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AL157827.1-201ENST00000447622 132 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC092647.2-201ENST00000452998 253 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 HMGN2P25-201ENST00000486956 268 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RN7SL244P-201ENST00000493405 297 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 HMGB1P3-201ENST00000502802 616 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 HAUS1P1-201ENST00000505275 832 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC004980.4-201ENST00000513375 203 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RNA5SP43-201ENST00000516559 110 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RNU6-347P-201ENST00000516658 105 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 OR7E128P-201ENST00000532736 1024 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RPL23AP97-201ENST00000568955 471 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RN7SL802P-201ENST00000577858 299 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AP004372.1-201ENST00000604842 844 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC239803.2-201ENST00000610161 430 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC008785.1-201ENST00000624475 456 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 SAMMSON-226ENST00000642089 1582 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 CASC19-284ENST00000642142 1868 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC135352.1-201ENST00000506173 1418 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 FAM35DP-201ENST00000323387 2712 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 ZNF962P-201ENST00000443465 3140 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 SNORA74A-201ENST00000364089 198 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RNU6-178P-201ENST00000384631 104 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AL138878.1-201ENST00000405131 347 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RN7SKP213-201ENST00000410746 298 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AF186996.5-201ENST00000418098 904 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RPL7P4-203ENST00000430239 730 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AL162388.1-201ENST00000450912 352 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 APOOP2-201ENST00000461561 539 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RPSAP50-201ENST00000481955 852 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 IGLV2-34-201ENST00000490007 283 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC090543.1-201ENST00000492168 485 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 SNRPCP2-201ENST00000504370 475 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC025554.1-201ENST00000505641 188 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RNU6-362P-201ENST00000516736 90 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 MIR5699-201ENST00000578903 90 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 RN7SL753P-201ENST00000581238 290 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC005229.3-201ENST00000603438 323 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC100814.1-201ENST00000606963 623 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC135803.1-201ENST00000608748 565 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AP000894.4-201ENST00000610185 483 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 SDR42E1P1-201ENST00000611327 477 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms