Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NPM1P33-201ENST00000438918 872 ntBASIC4.75□□□□□ -1.65
LDLRP01130 RPS29P10-201ENST00000439197 166 ntBASIC4.75□□□□□ -1.65
LDLRP01130 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 AC037198.2-201ENST00000478845 733 ntBASIC4.75□□□□□ -1.65
LDLRP01130 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
LDLRP01130 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 AC138701.1-201ENST00000524329 714 ntBASIC4.75□□□□□ -1.65
LDLRP01130 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 TOMM20P2-201ENST00000540082 421 ntBASIC4.75□□□□□ -1.65
LDLRP01130 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.75□□□□□ -1.65
LDLRP01130 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.75□□□□□ -1.65
LDLRP01130 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 AC104229.1-201ENST00000561364 255 ntBASIC4.75□□□□□ -1.65
LDLRP01130 ATP5J2P6-201ENST00000565203 266 ntBASIC4.75□□□□□ -1.65
LDLRP01130 AC104687.2-201ENST00000604442 342 ntBASIC4.75□□□□□ -1.65
LDLRP01130 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 AC021106.3-201ENST00000623925 531 ntBASIC4.75□□□□□ -1.65
LDLRP01130 AP003476.1-201ENST00000623984 516 ntBASIC4.75□□□□□ -1.65
LDLRP01130 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 AC021242.1-201ENST00000507315 2035 ntBASIC4.75□□□□□ -1.65
LDLRP01130 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LDLRP01130 RNU6-178P-201ENST00000384631 104 ntBASIC4.74□□□□□ -1.65
LDLRP01130 RNU6-1000P-201ENST00000391066 106 ntBASIC4.74□□□□□ -1.65
LDLRP01130 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 GJA6P-201ENST00000415117 1042 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC009302.1-201ENST00000417147 390 ntBASIC4.74□□□□□ -1.65
LDLRP01130 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 NMNAT1P2-201ENST00000435192 860 ntBASIC4.74□□□□□ -1.65
LDLRP01130 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LDLRP01130 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 RHEBP2-201ENST00000450289 600 ntBASIC4.74□□□□□ -1.65
LDLRP01130 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 AC243772.1-201ENST00000451620 410 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 AL513533.1-201ENST00000453728 415 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC008379.1-201ENST00000463655 464 ntBASIC4.74□□□□□ -1.65
LDLRP01130 RN7SL354P-201ENST00000469282 294 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC097484.1-201ENST00000471148 389 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC007537.2-201ENST00000472093 511 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.74□□□□□ -1.65
LDLRP01130 IGBP1P5-201ENST00000507524 1000 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 SNORA31.13-201ENST00000516624 135 ntBASIC4.74□□□□□ -1.65
LDLRP01130 RNA5SP373-201ENST00000517271 95 ntBASIC4.74□□□□□ -1.65
LDLRP01130 IGKV2D-10-201ENST00000520194 281 ntBASIC4.74□□□□□ -1.65
LDLRP01130 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.74□□□□□ -1.65
LDLRP01130 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.74□□□□□ -1.65
LDLRP01130 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.74□□□□□ -1.65
LDLRP01130 AC009117.1-201ENST00000563948 554 ntBASIC4.74□□□□□ -1.65
LDLRP01130 EIF1P5-201ENST00000585002 234 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AL031320.1-201ENST00000604177 357 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 RMST_10.1-201ENST00000616309 154 ntBASIC4.74□□□□□ -1.65
LDLRP01130 AC078880.5-201ENST00000617845 421 ntBASIC4.74□□□□□ -1.65
LDLRP01130 MIR7703-201ENST00000620784 77 ntBASIC4.74□□□□□ -1.65
LDLRP01130 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.74□□□□□ -1.65
LDLRP01130 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.74□□□□□ -1.65
LDLRP01130 AC119674.1-212ENST00000641155 993 ntBASIC4.74□□□□□ -1.65
LDLRP01130 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LDLRP01130 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.74□□□□□ -1.65
LDLRP01130 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LDLRP01130 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.74□□□□□ -1.65
LDLRP01130 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.74□□□□□ -1.65
LDLRP01130 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms