Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 H2AFZP5-201ENST00000446960 382 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 RN7SL98P-201ENST00000462271 300 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AC104763.1-201ENST00000475274 360 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 NPM1P29-201ENST00000483112 803 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 HMGB1P3-201ENST00000502802 616 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 HIGD1AP18-201ENST00000520730 278 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 SMARCE1P4-201ENST00000523647 241 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.73□□□□□ -1.65
PDGFBP01127 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC007423.1-201ENST00000605009 627 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC012467.1-201ENST00000607740 256 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AC244100.1-202ENST00000621554 382 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AC005618.4-201ENST00000625053 554 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC108467.2-201ENST00000617640 1597 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AP001029.2-203ENST00000589795 4910 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
PDGFBP01127 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDGFBP01127 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
PDGFBP01127 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDGFBP01127 SNORA27.3-201ENST00000364937 134 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFBP01127 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 GSTM3P2-201ENST00000412746 530 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC011998.1-201ENST00000433403 117 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFBP01127 HMGB1P26-201ENST00000452520 628 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 RN7SL197P-201ENST00000466981 299 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFBP01127 PARP4P3-201ENST00000510265 317 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC026726.1-201ENST00000512859 601 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFBP01127 AC138832.1-201ENST00000522871 556 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFBP01127 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFBP01127 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFBP01127 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 AL161756.2-201ENST00000604597 246 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 OR7A19P-201ENST00000608051 733 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC010632.3-201ENST00000611377 369 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC003001.2-201ENST00000616294 831 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC139769.3-201ENST00000618383 175 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 AC007342.8-201ENST00000623278 678 ntBASIC4.72□□□□□ -1.65
PDGFBP01127 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFBP01127 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFBP01127 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFBP01127 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PDGFBP01127 PCAT14-202ENST00000627127 3935 ntBASIC4.71□□□□□ -1.65
PDGFBP01127 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.71□□□□□ -1.65
PDGFBP01127 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PDGFBP01127 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFBP01127 RNU1-132P-201ENST00000364300 164 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 MIR92A2-201ENST00000385299 75 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDGFBP01127 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 PTMAP2-201ENST00000397627 327 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 QRSL1P2-201ENST00000418582 964 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 AL117339.2-201ENST00000430475 180 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms