Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-543P-201ENST00000362576 108 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 RNU6-621P-201ENST00000364752 109 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 Y_RNA.311-201ENST00000365068 96 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 RN7SKP81-201ENST00000365603 331 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 snosnR66.1-201ENST00000391095 99 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AL512422.1-201ENST00000407033 553 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 RN7SKP229-201ENST00000410465 302 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 RNU6-575P-201ENST00000411326 105 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 HMGN1P14-201ENST00000412459 517 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 NPM1P4-201ENST00000414095 812 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 AC007568.1-201ENST00000422912 471 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 RPL7P44-201ENST00000424827 742 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.47□□□□□ -1.53
CNOT4O95628 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 MTND3P21-201ENST00000433774 331 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 AL022237.1-201ENST00000446663 358 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 COX6CP12-201ENST00000446748 202 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AP000542.1-201ENST00000448473 371 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 AC002553.3-201ENST00000453002 341 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC041039.1-201ENST00000485656 536 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 LSM3P4-201ENST00000502948 309 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 RNA5SP434-201ENST00000516647 121 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 OR8A2P-201ENST00000528631 952 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 DEFB108A-201ENST00000530110 222 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.47□□□□□ -1.53
CNOT4O95628 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.47□□□□□ -1.53
CNOT4O95628 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.47□□□□□ -1.53
CNOT4O95628 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 AC127381.1-201ENST00000555979 939 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 DPPA2P4-201ENST00000563717 878 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC018552.3-201ENST00000567416 561 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 TXNP4-201ENST00000575018 310 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC008507.3-201ENST00000585753 472 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.47□□□□□ -1.53
CNOT4O95628 AL390816.3-201ENST00000604527 1066 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AL591167.1-201ENST00000607321 456 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC243654.2-201ENST00000612843 443 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 U1.25-201ENST00000614085 162 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC007014.2-201ENST00000615581 479 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 U6.107-201ENST00000637108 79 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CNOT4O95628 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 AL121839.2-201ENST00000565058 6943 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CNOT4O95628 MTCO1P11-201ENST00000429111 1528 ntBASIC5.47□□□□□ -1.53
CNOT4O95628 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNOT4O95628 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.47□□□□□ -1.53
CNOT4O95628 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.47□□□□□ -1.53
CNOT4O95628 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.46□□□□□ -1.53
CNOT4O95628 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.46□□□□□ -1.53
CNOT4O95628 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CNOT4O95628 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CNOT4O95628 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.46□□□□□ -1.53
CNOT4O95628 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.46□□□□□ -1.53
CNOT4O95628 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CNOT4O95628 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNOT4O95628 AL451142.2-201ENST00000429076 2090 ntBASIC5.46□□□□□ -1.53
CNOT4O95628 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.46□□□□□ -1.54
CNOT4O95628 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNOT4O95628 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNOT4O95628 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNOT4O95628 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNOT4O95628 RNU6-348P-201ENST00000384386 107 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 RNU6-146P-201ENST00000384602 108 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 MIR525-201ENST00000384978 85 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 RNA5SP156-201ENST00000410250 110 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.46□□□□□ -1.54
CNOT4O95628 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.46□□□□□ -1.54
CNOT4O95628 Z97055.1-201ENST00000419730 712 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.46□□□□□ -1.54
CNOT4O95628 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.46□□□□□ -1.54
CNOT4O95628 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AL158073.1-201ENST00000426848 1104 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 MTCO1P54-201ENST00000430139 712 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.46□□□□□ -1.54
CNOT4O95628 DNAJC19P4-201ENST00000440115 345 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.46□□□□□ -1.54
CNOT4O95628 NANOGNBP1-201ENST00000448444 480 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 MTND5P20-201ENST00000448677 143 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AC092967.1-201ENST00000449016 481 ntBASIC5.46□□□□□ -1.54
CNOT4O95628 AL935212.3-201ENST00000450729 284 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms