Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF40O75150 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF40O75150 MIR199B-201ENST00000384849 110 ntBASIC7.64□□□□□ -1.19
RNF40O75150 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF40O75150 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 RPL37P10-201ENST00000412884 288 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC004986.1-201ENST00000414855 607 ntBASIC7.64□□□□□ -1.19
RNF40O75150 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 AC234771.4-201ENST00000441416 730 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AL356133.1-201ENST00000444762 372 ntBASIC7.64□□□□□ -1.19
RNF40O75150 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 AL031736.1-201ENST00000449688 618 ntBASIC7.64□□□□□ -1.19
RNF40O75150 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 RNU7-136P-201ENST00000458819 69 ntBASIC7.64□□□□□ -1.19
RNF40O75150 RPSAP24-201ENST00000461543 873 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC026336.1-201ENST00000466577 351 ntBASIC7.64□□□□□ -1.19
RNF40O75150 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 RPL12P31-201ENST00000478433 450 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 CHCHD2P7-201ENST00000508008 452 ntBASIC7.64□□□□□ -1.19
RNF40O75150 MRPS5P3-201ENST00000515577 166 ntBASIC7.64□□□□□ -1.19
RNF40O75150 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 AC130366.1-201ENST00000526505 1192 ntBASIC7.64□□□□□ -1.19
RNF40O75150 NDUFA3P2-201ENST00000531434 232 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF40O75150 AC123904.2-201ENST00000548059 300 ntBASIC7.64□□□□□ -1.19
RNF40O75150 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF40O75150 HMGN1P26-201ENST00000558737 303 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF40O75150 AC113195.1-201ENST00000579952 141 ntBASIC7.64□□□□□ -1.19
RNF40O75150 MIR3118-1-201ENST00000581787 76 ntBASIC7.64□□□□□ -1.19
RNF40O75150 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 AC046144.1-201ENST00000478559 1853 ntBASIC7.64□□□□□ -1.19
RNF40O75150 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 AC008627.1-201ENST00000517511 1704 ntBASIC7.64□□□□□ -1.19
RNF40O75150 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 AC062029.1-202ENST00000606164 3651 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 Y_RNA.117-201ENST00000363294 101 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RNU6-1040P-201ENST00000383974 107 ntBASIC7.63□□□□□ -1.19
RNF40O75150 Y_RNA.447-201ENST00000384184 113 ntBASIC7.63□□□□□ -1.19
RNF40O75150 Y_RNA.455-201ENST00000384230 98 ntBASIC7.63□□□□□ -1.19
RNF40O75150 SSXP10-201ENST00000402595 565 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF40O75150 CYP4F32P-201ENST00000426492 504 ntBASIC7.63□□□□□ -1.19
RNF40O75150 FABP7P2-201ENST00000429946 379 ntBASIC7.63□□□□□ -1.19
RNF40O75150 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 RPS27AP15-201ENST00000447672 466 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF40O75150 RN7SL392P-201ENST00000473024 299 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC073610.1-201ENST00000489971 396 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RPL10P7-201ENST00000495649 625 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RN7SL612P-201ENST00000497704 295 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC027801.3-201ENST00000515049 698 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RNA5SP92-201ENST00000516437 110 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AL109628.1-201ENST00000556877 366 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF40O75150 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF40O75150 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF40O75150 RN7SL835P-201ENST00000579920 262 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC010463.3-201ENST00000594077 500 ntBASIC7.63□□□□□ -1.19
RNF40O75150 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms