Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC021146.7-201ENST00000509604 775 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 AC034244.2-201ENST00000514668 858 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC010476.1-201ENST00000519111 851 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN3O15551 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC027455.1-201ENST00000574104 594 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN3O15551 RPL7P50-201ENST00000600588 727 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 AC079587.1-201ENST00000603846 277 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN3O15551 AC026979.4-201ENST00000606555 645 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN3O15551 DDX18P4-201ENST00000511690 1966 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN3O15551 AC090017.1-201ENST00000548612 1779 ntBASIC4.83□□□□□ -1.64
CLDN3O15551 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CLDN3O15551 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN3O15551 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 MTCO1P8-201ENST00000416914 1523 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 AC008033.1-201ENST00000216407 1162 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 RNU6-152P-201ENST00000384037 107 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RPS20P14-201ENST00000412545 360 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 AC004448.2-201ENST00000422360 586 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN3O15551 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
CLDN3O15551 MTND6P18-201ENST00000439477 513 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 UBE2V1P3-201ENST00000439651 417 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN3O15551 AC114495.1-201ENST00000441274 436 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 AL606490.8-201ENST00000441624 319 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 PHBP16-201ENST00000446318 950 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 DDX39BP2-208ENST00000453923 258 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RPL7AP52-201ENST00000458096 790 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RN7SL98P-201ENST00000462271 300 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 NDUFA5P9-201ENST00000472609 340 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RPS27AP16-201ENST00000492222 470 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RN7SL812P-201ENST00000493791 279 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 ACTR6P1-201ENST00000514311 1104 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN3O15551 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN3O15551 uc_338.13-201ENST00000618243 179 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 AC015908.5-201ENST00000623289 343 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 RPL23AP61-201ENST00000623642 466 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN3O15551 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 AC083843.3-201ENST00000623679 2186 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN3O15551 AP000756.2-201ENST00000624168 2567 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLDN3O15551 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 AC000123.3-201ENST00000624029 4975 ntBASIC4.82□□□□□ -1.64
CLDN3O15551 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CLDN3O15551 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN3O15551 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 HSPD1P11-201ENST00000508643 1702 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 MIR331-201ENST00000362302 94 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 RNA5SP509-201ENST00000364577 119 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 RN7SKP167-201ENST00000411047 285 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CEACAMP8-201ENST00000413902 580 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 RPL6P29-201ENST00000414863 865 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 AL139095.3-201ENST00000419672 1203 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN3O15551 RFESDP1-201ENST00000422350 461 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC099336.2-201ENST00000422457 254 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 RPS26P47-201ENST00000427219 348 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CDY14P-201ENST00000431260 1014 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN3O15551 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 AC073143.1-201ENST00000436316 395 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 NPM1P33-201ENST00000438918 872 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CDY12P-201ENST00000440679 1015 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CDY13P-201ENST00000445813 1015 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN3O15551 CDY23P-201ENST00000451661 1014 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 RPL7P32-201ENST00000457119 744 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC099560.2-201ENST00000457554 255 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC092905.1-201ENST00000467527 949 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CDH12P2-201ENST00000504393 298 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 HPRT1P1-201ENST00000509498 657 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms