Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RNU4-31P-201ENST00000384211 141 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RNU6-185P-201ENST00000384421 107 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RPS3AP23-201ENST00000401762 784 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AL359643.1-201ENST00000404109 423 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RAB28P1-201ENST00000411517 641 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 COX6CP17-201ENST00000421389 185 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 FABP7P1-201ENST00000424004 391 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 CENPIP1-201ENST00000425713 902 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AL160175.1-201ENST00000428124 247 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC016712.1-201ENST00000431088 378 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RPS17P8-201ENST00000434525 335 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC092905.1-201ENST00000467527 949 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RPL23AP12-201ENST00000467573 473 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RN7SL558P-201ENST00000497468 299 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 OR5M2P-201ENST00000529003 936 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC040174.2-201ENST00000602701 465 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 OR4H6P-202ENST00000603819 340 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 CCT8P1-201ENST00000413611 1657 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AL442639.1-201ENST00000625030 1899 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RNU6-146P-201ENST00000384602 108 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RPS12P5-201ENST00000423449 371 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 MTND4P24-201ENST00000424002 397 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RPL12P34-201ENST00000424532 479 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CEACAMP6-201ENST00000452007 574 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RPL7P48-201ENST00000461513 746 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC090686.1-201ENST00000481577 749 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 ARL4AP1-201ENST00000503220 705 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 HMGB3P16-201ENST00000508037 287 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC091868.1-201ENST00000508746 304 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 MTND2P31-201ENST00000512602 616 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC005242.1-201ENST00000585658 438 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC068790.7-201ENST00000602347 528 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC093765.1-201ENST00000603758 881 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC019193.2-201ENST00000610012 634 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC067931.1-201ENST00000624190 671 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AC091948.2-201ENST00000636510 279 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AL359922.3-201ENST00000624779 1670 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms