Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 TTC39DP-201ENST00000416781 1688 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 RN7SKP263-201ENST00000411194 309 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC002524.1-201ENST00000411687 547 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 RPS20P25-201ENST00000412447 352 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AL356095.1-201ENST00000417217 199 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 MRPL50P1-201ENST00000431951 384 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 RNA5SP246-201ENST00000458909 119 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 RPS29P19-201ENST00000479709 171 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 OR52A4P-203ENST00000498233 1014 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 MIR2116-201ENST00000517221 80 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC105233.3-201ENST00000531125 744 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC084824.1-201ENST00000550917 1005 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 BNIP3P7-201ENST00000605641 516 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 MIR6867-201ENST00000610636 67 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AL138721.1-201ENST00000616756 179 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AC112484.5-201ENST00000624189 228 ntBASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMIM28A0A1B0GU29 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC006484.1-201ENST00000435086 1884 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 OR8G2P-201ENST00000412796 908 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 SEPT7P8-201ENST00000413308 775 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 RAB9AP4-201ENST00000415230 609 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AL161631.1-201ENST00000417933 486 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 RBMY1KP-201ENST00000423480 476 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AF213884.1-201ENST00000488102 463 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 SLC25A36P1-201ENST00000590111 465 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 FAM60CP-201ENST00000591086 664 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC010608.2-201ENST00000624830 470 ntBASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SMIM28A0A1B0GU29 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 SPRR2C-201ENST00000290702 219 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 RNA5SP130-201ENST00000364431 114 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 RNU6-891P-201ENST00000384280 111 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 RNU6-729P-201ENST00000384399 107 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 Z85994.2-201ENST00000434327 452 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 HSFY6P-201ENST00000445573 403 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 BNIP3P41-201ENST00000503774 571 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms