Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RN7SKP47-201ENST00000365347 328 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RNA5SP53-201ENST00000391299 120 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AL136116.1-201ENST00000403591 381 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 SRIP2-201ENST00000428470 166 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 FTLP17-201ENST00000432567 525 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 ATP5LP4-201ENST00000434169 307 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 HMGB1P18-201ENST00000438801 619 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC104651.2-201ENST00000447549 528 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TCEA1P1-201ENST00000449716 880 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 ENPP7P3-201ENST00000509123 241 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.691-201ENST00000516611 103 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 OR4C1P-201ENST00000530880 937 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 BNIP3P6-201ENST00000549284 499 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC015818.6-201ENST00000584274 634 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC115085.1-201ENST00000588924 229 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC092032.1-201ENST00000603090 165 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC092960.1-201ENST00000604762 351 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC093388.1-201ENST00000609166 430 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR6726-201ENST00000613751 61 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC022106.2-201ENST00000620114 757 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC090617.10-201ENST00000624308 134 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AL355377.1-201ENST00000621125 1653 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF652P1-201ENST00000442420 1309 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC105749.1-201ENST00000631338 2008 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CDY19P-201ENST00000411668 1613 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CDY18P-201ENST00000438294 1609 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-254P-201ENST00000363377 107 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 RNA5SP114-201ENST00000363780 113 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SNORA63C-201ENST00000364578 129 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SNORA4.3-201ENST00000365564 137 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-1160P-201ENST00000384546 104 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL078604.1-201ENST00000404609 466 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 MTCO3P21-201ENST00000430791 643 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 Z80107.2-201ENST00000445127 392 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 HMGB1P4-201ENST00000455362 567 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC010878.1-201ENST00000456500 1047 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SNORD19B-201ENST00000459623 84 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC112206.3-201ENST00000514578 389 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 TRMT10BP1-201ENST00000519377 943 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC022616.3-201ENST00000523940 148 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL591767.3-201ENST00000554632 525 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 PPIAP6-201ENST00000557078 499 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR5095-201ENST00000578844 88 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC008638.3-201ENST00000603341 463 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms