Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL445567.1-201ENST00000439121 144 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC019185.1-201ENST00000442718 389 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 TPTE2P6-202ENST00000445572 1007 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL450023.1-201ENST00000450868 751 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 VDAC2P4-201ENST00000452925 711 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 RPL23AP71-201ENST00000470966 469 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 GAPDHP36-201ENST00000480688 918 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC090638.1-201ENST00000498296 909 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PGAM1P13-201ENST00000507497 754 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 MIR7853-201ENST00000584820 132 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AP003973.1-201ENST00000604639 691 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC105129.3-201ENST00000605455 485 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL354976.1-201ENST00000613843 387 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC092140.2-201ENST00000618027 521 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC018926.3-201ENST00000618841 406 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 SAMMSON-209ENST00000641222 1100 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC087516.1-201ENST00000561236 2428 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC021755.1-201ENST00000559747 1447 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 ASNSP1-204ENST00000641977 1664 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL606537.1-201ENST00000607258 2011 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP115-201ENST00000363177 317 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP145-201ENST00000363291 303 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP6-201ENST00000364795 319 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 Y_RNA.318-201ENST00000365131 97 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD65.1-201ENST00000390889 71 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 GSTA8P-201ENST00000404253 637 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 NRBF2P2-201ENST00000413087 861 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC098592.1-201ENST00000419352 333 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC011233.1-201ENST00000422812 283 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL590762.4-201ENST00000425885 253 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC073069.1-201ENST00000428657 441 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 SEPT7P5-201ENST00000434048 306 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 OR6D1P-201ENST00000436165 939 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 PPIAP17-201ENST00000438507 471 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 UBE2D3P4-201ENST00000441973 436 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 FAR2P1-206ENST00000449736 709 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 HMGB1P4-201ENST00000455362 567 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RNU7-125P-201ENST00000458760 62 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RPL35AP28-201ENST00000459730 331 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SL222P-201ENST00000476452 299 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RPL7P18-201ENST00000478965 734 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RPSAP50-201ENST00000481955 852 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC079395.1-201ENST00000510981 262 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC091912.1-201ENST00000511351 248 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC010285.3-201ENST00000511668 676 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 TCP11X3P-202ENST00000514289 1254 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 MTND4LP31-201ENST00000514859 294 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC105185.1-201ENST00000518705 535 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC005832.3-201ENST00000537929 631 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms