Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 RPS17P11-201ENST00000474297 293 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 SCARNA22-201ENST00000503991 125 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 HAUS1P1-201ENST00000505275 832 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 ENPP7P9-201ENST00000514456 627 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 RNU6-415P-201ENST00000516252 97 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 IGHV3-63-201ENST00000518422 341 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 GLRXP2-201ENST00000555594 321 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC084759.1-201ENST00000561168 290 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC104229.1-201ENST00000561364 255 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 FAM27B-201ENST00000610601 213 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AL049794.2-201ENST00000616301 365 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AL022401.1-201ENST00000619498 108 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC022106.2-201ENST00000620114 757 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AL356118.1-201ENST00000635272 1078 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC099654.9-201ENST00000637055 678 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 Z95327.2-201ENST00000414579 1873 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC026951.1-201ENST00000559530 2459 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 AC000123.3-201ENST00000624029 4975 ntBASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC6Q9UBN7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RNU4-31P-201ENST00000384211 141 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RNU6-729P-201ENST00000384399 107 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 HMGB3P19-201ENST00000403971 560 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AL359643.1-201ENST00000404109 423 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 VN1R51P-201ENST00000411675 945 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 CENPIP1-201ENST00000425713 902 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 NDUFA5P10-201ENST00000432147 357 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RPS5P7-201ENST00000456664 608 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RPS17P2-201ENST00000461663 408 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 RPL21P47-201ENST00000483696 477 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC073073.1-201ENST00000493920 463 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AK3P4-201ENST00000504283 583 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 BTG4P1-201ENST00000510421 183 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 MIR4284-201ENST00000578924 81 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC034236.3-201ENST00000605999 461 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC034229.4-201ENST00000607861 441 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 AC078880.5-201ENST00000617845 421 ntBASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC6Q9UBN7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 DHX40P1-201ENST00000588725 1412 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 RNU6-252P-201ENST00000363232 107 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 SNORA70F-201ENST00000384142 135 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 AP002784.2-201ENST00000397300 549 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 AL049697.2-201ENST00000403708 294 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 AL355615.1-201ENST00000406187 641 ntBASIC5.4□□□□□ -1.54
HDAC6Q9UBN7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms