Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 UGT2B26P-201ENST00000508672 1613 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC091046.3-201ENST00000631455 1574 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 A2MP1-204ENST00000566278 4130 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC021146.4-201ENST00000309229 279 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RNA5SP509-201ENST00000364577 119 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RNA5SP479-201ENST00000364858 117 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RN7SKP199-201ENST00000410325 305 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AL445528.1-201ENST00000426330 420 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RPL23AP4-201ENST00000427757 463 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC004975.1-201ENST00000428733 208 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RPS26P4-201ENST00000431743 355 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 MRPS33P4-201ENST00000434892 317 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 CBX1P1-201ENST00000440184 427 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AL354710.1-201ENST00000453641 246 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 CCDC75P1-201ENST00000469247 791 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RN7SL41P-201ENST00000476144 297 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RN7SKP21-201ENST00000516503 220 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RPL23AP53-201ENST00000521854 457 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 OR8G5-201ENST00000524943 1041 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC023575.1-201ENST00000580510 358 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC005021.1-201ENST00000608730 355 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AL121890.3-201ENST00000618494 516 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC011944.2-201ENST00000624440 683 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC006453.5-201ENST00000636451 619 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC007342.7-201ENST00000624610 2337 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AL672167.1-205ENST00000641112 3080 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC018529.3-201ENST00000624212 2254 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 NPM1P10-201ENST00000398310 865 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 RPL7AP25-201ENST00000423357 805 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC022022.1-201ENST00000430304 178 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC007563.3-201ENST00000433233 371 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CALM1P2-201ENST00000452941 448 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC010618.1-201ENST00000469924 477 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 NDUFB4P12-201ENST00000513465 390 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 MTCO2P22-201ENST00000603246 681 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC123786.2-201ENST00000603459 275 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC012409.3-201ENST00000611343 981 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC116447.1-201ENST00000613153 453 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AL133243.1-201ENST00000614487 366 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC009951.1-201ENST00000623674 2614 ntBASIC4.79□□□□□ -1.64
HPS4Q9NQG7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS4Q9NQG7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 SNORA71.2-201ENST00000364941 134 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 ATP5F1P2-201ENST00000398143 760 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms