Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL663109.1-201ENST00000411498 844 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC245060.4-201ENST00000413293 1121 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC007394.1-201ENST00000421941 531 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 OR52J1P-201ENST00000450596 932 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 ZNF114P1-201ENST00000453500 292 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC090602.1-201ENST00000469695 252 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC079841.1-201ENST00000481228 950 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 RPL38P3-201ENST00000484463 213 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC006499.5-201ENST00000505037 514 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC074051.3-201ENST00000570238 358 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC106028.5-201ENST00000610332 395 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC069234.4-201ENST00000621276 412 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AL359740.1-201ENST00000624340 592 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC120349.2-201ENST00000625002 298 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 AC092104.1-201ENST00000497346 1441 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 ZNF37BP-203ENST00000452306 1352 ntBASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM39Q9HCM9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 RNU4-75P-201ENST00000364621 146 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 RNU1-59P-201ENST00000364829 162 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MIR506-201ENST00000384998 124 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC004022.2-201ENST00000413824 193 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AK4P4-201ENST00000419465 646 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 REREP1Y-201ENST00000422655 198 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC093698.1-201ENST00000423843 571 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 USP9YP14-201ENST00000430663 563 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 REREP2Y-201ENST00000439103 200 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MTND2P20-201ENST00000440805 661 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MTCO1P19-201ENST00000443487 500 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 OR52E3P-201ENST00000452083 936 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AL445665.1-202ENST00000452436 324 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 HMGN3P1-201ENST00000453847 193 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 USP9YP10-201ENST00000454868 628 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 RNU1-88P-201ENST00000459274 128 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 USP9YP5-201ENST00000511770 630 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 ARL2BPP5-201ENST00000523141 481 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC079600.1-201ENST00000550326 297 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 MIR4260-201ENST00000583107 67 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC078795.2-201ENST00000602835 1252 ntBASIC5.78□□□□□ -1.48
TRIM39Q9HCM9 AC116651.1-201ENST00000609724 556 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms