Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PTMAP3-201ENST00000447474 330 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 RPL7P16-201ENST00000479738 738 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 NPM1P52-201ENST00000518264 846 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 OR1F2P-201ENST00000570470 933 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 BNIP3P39-201ENST00000601077 554 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL158211.2-201ENST00000607282 395 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL159169.2-201ENST00000610061 1269 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 MIR4727-201ENST00000622232 55 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 FP325313.1-201ENST00000638228 703 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 CR788268.1-201ENST00000603931 1809 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 RN7SKP149-201ENST00000363008 344 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 RNA5SP507-201ENST00000363603 121 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 GCNT6-201ENST00000379591 934 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 RNU6-152P-201ENST00000384037 107 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 GLULP6-201ENST00000399502 913 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC092647.1-201ENST00000420654 287 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 RPS12P5-201ENST00000423449 371 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 FAR1P1-201ENST00000427163 934 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AP001324.1-201ENST00000428553 399 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC026348.1-201ENST00000462549 1053 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 SYT14P1-201ENST00000481459 721 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 PPM1AP1-201ENST00000502740 1135 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 ATP1B1P1-201ENST00000509767 915 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 RN7SKP34-201ENST00000516142 244 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 SNORA70.17-201ENST00000516449 133 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 HMGN2P6-201ENST00000551091 273 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC016180.1-201ENST00000567945 403 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 AC012603.1-201ENST00000606424 528 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 ZNF962P-201ENST00000443465 3140 ntBASIC5.28□□□□□ -1.56
UPF2Q9HAU5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPF2Q9HAU5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AC068254.2-201ENST00000623938 3577 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AC010132.2-201ENST00000295493 1043 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 YWHAEP5-201ENST00000431545 765 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AL606490.8-201ENST00000441624 319 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 RPL31P53-201ENST00000457065 348 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 CCDC75P1-201ENST00000469247 791 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AC004815.1-201ENST00000484185 331 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 RPS6P4-201ENST00000494693 758 ntBASIC5.27□□□□□ -1.57
UPF2Q9HAU5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF2Q9HAU5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms