Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 TPMTP1-201ENST00000592307 737 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC022916.3-201ENST00000592961 742 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC091193.1-201ENST00000604640 448 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 MIR6861-201ENST00000618657 64 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 OR52B5P-202ENST00000641118 1110 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 Y_RNA.3-201ENST00000362331 103 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 SNORA40.3-201ENST00000390964 122 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 MTATP6P27-201ENST00000416987 621 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 Z97055.1-201ENST00000419730 712 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 RPL7AP14-201ENST00000424041 802 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 NPM1P34-201ENST00000428821 893 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AP000281.1-201ENST00000444036 316 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 USP9YP34-201ENST00000453983 808 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC009963.3-201ENST00000458090 486 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 RN7SL326P-201ENST00000477493 296 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 LSM3P4-201ENST00000502948 309 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 SNORA81.2-201ENST00000516868 170 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 PAICSP4-201ENST00000517543 1253 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC053481.3-201ENST00000577881 843 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC011497.2-201ENST00000600255 639 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC103792.1-201ENST00000603591 919 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC097467.4-201ENST00000605504 141 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 RPSAP75-201ENST00000605848 301 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC006566.1-201ENST00000608943 513 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC008498.1-201ENST00000613012 531 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC006378.2-201ENST00000623178 2476 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 OLMALINC-203ENST00000641087 3779 ntBASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
TRAIPQ9BWF2 AC021242.1-201ENST00000507315 2035 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 SAGE2P-201ENST00000420011 2126 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RNY4P24-201ENST00000362735 96 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 Y_RNA.97-201ENST00000363094 102 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RNVU1-3-201ENST00000364313 161 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 MTCO1P17-201ENST00000411522 491 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC008065.1-201ENST00000428525 348 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 Z74696.2-201ENST00000436514 498 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AL357520.1-201ENST00000441557 453 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC016724.1-201ENST00000453215 421 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC103563.5-201ENST00000455643 364 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 BX322784.1-201ENST00000455793 1077 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RPL31P50-201ENST00000471002 296 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 RPL12P30-201ENST00000488389 499 ntBASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.94□□□□□ -1.3
TRAIPQ9BWF2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms