Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC106872.2-201ENST00000494303 480 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 GCSHP4-201ENST00000538792 439 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC027176.2-201ENST00000559166 746 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC006116.3-201ENST00000592968 361 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC098483.2-201ENST00000603158 454 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC015982.1-201ENST00000608113 465 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AL049767.1-202ENST00000637826 242 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC016588.2-201ENST00000632484 3021 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC28BQ9BUN5 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC28BQ9BUN5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CCDC28BQ9BUN5 RNA5SP307-201ENST00000362863 116 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 RPL5P19-201ENST00000404228 893 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AL138878.1-201ENST00000405131 347 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CHEK2P3-201ENST00000416118 248 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 RAD23BP1-201ENST00000421404 1227 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC112498.1-201ENST00000444401 332 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 VN1R32P-201ENST00000452234 905 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 DDX39BP2-208ENST00000453923 258 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AL133244.1-201ENST00000456007 258 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 RN7SL30P-201ENST00000488416 306 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 PRELID3BP7-201ENST00000503606 469 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC018797.3-201ENST00000513388 1241 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC105129.1-201ENST00000560250 297 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 RPL23AP97-201ENST00000568955 471 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 BPIFA4P-203ENST00000603168 689 ntBASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC28BQ9BUN5 FAM35DP-201ENST00000323387 2712 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AL356317.1-201ENST00000396110 1436 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC139769.1-204ENST00000472297 1931 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 RPL23P2-201ENST00000320371 421 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 RNU6-1251P-201ENST00000364502 107 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 U3.25-201ENST00000391209 220 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC140479.3-201ENST00000418944 1126 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 OR2B7P-201ENST00000429302 934 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 SUMO2P1-206ENST00000445436 284 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC099063.2-201ENST00000446360 662 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AURKAPS1-201ENST00000451805 1212 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 HMGB3P22-202ENST00000451823 572 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC090568.1-201ENST00000509499 856 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 FABP5P6-201ENST00000510588 409 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC027338.1-201ENST00000514840 825 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 RN7SKP66-201ENST00000516681 231 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 RN7SKP147-201ENST00000517154 244 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC092451.2-201ENST00000538746 658 ntBASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC28BQ9BUN5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms