Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK1Q99986 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AP005119.1-201ENST00000580956 292 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AC069304.2-201ENST00000605154 435 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 AL022394.1-201ENST00000606979 292 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK1Q99986 AC013562.2-201ENST00000611632 603 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 AC090116.1-201ENST00000615679 446 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 AL136228.1-201ENST00000622221 319 ntBASIC5.17□□□□□ -1.58
VRK1Q99986 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK1Q99986 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK1Q99986 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VRK1Q99986 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK1Q99986 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK1Q99986 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VRK1Q99986 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK1Q99986 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK1Q99986 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VRK1Q99986 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 HDAC1P2-201ENST00000453661 1398 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK1Q99986 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 Y_RNA.18-201ENST00000362461 102 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 Y_RNA.25-201ENST00000362528 102 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 RNU6-251P-201ENST00000363235 104 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 Y_RNA.505-201ENST00000384489 102 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 MIR506-201ENST00000384998 124 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VRK1Q99986 AL121978.1-201ENST00000402778 359 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 MIR1284-201ENST00000408337 120 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 NPM1P40-201ENST00000412758 733 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AL136133.1-201ENST00000413694 376 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC062016.2-201ENST00000420950 676 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC009237.2-201ENST00000421358 284 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 AC012519.1-201ENST00000424588 610 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 HSPD1P12-201ENST00000429127 1069 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK1Q99986 AC242426.1-201ENST00000435270 960 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 AL445466.1-201ENST00000448432 357 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 RPL31P15-201ENST00000449770 338 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 PPIAP20-201ENST00000449839 135 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 OR52E3P-201ENST00000452083 936 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 RPL7P51-201ENST00000490532 749 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK1Q99986 AC093281.2-201ENST00000510153 597 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 LTV1P1-201ENST00000510683 1237 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 MTCO2P32-201ENST00000514865 403 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 SCARNA18.1-201ENST00000516330 83 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 SNORA48.10-201ENST00000516965 160 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 RPL12P22-201ENST00000519073 490 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK1Q99986 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 OR8Q1P-201ENST00000526467 655 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 HIGD1AP10-201ENST00000527837 282 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 OR7K1P-201ENST00000546439 926 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK1Q99986 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.16□□□□□ -1.58
VRK1Q99986 AC009852.2-201ENST00000567898 485 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK1Q99986 AC006272.2-201ENST00000594725 163 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC010200.2-201ENST00000605098 235 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 RN7SKP299-201ENST00000606679 301 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC120349.2-201ENST00000625002 298 ntBASIC5.16□□□□□ -1.58
VRK1Q99986 AC099063.3-201ENST00000642066 185 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms