Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC008958.1-201ENST00000511047 682 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RNA5SP49-201ENST00000516450 115 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 RNA5SP519-201ENST00000516480 119 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 RNA5SP73-201ENST00000516744 108 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 MAPK10-349ENST00000641767 3661 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 RNU1-108P-201ENST00000362556 161 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 RNA5SP171-201ENST00000391071 115 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 VDAC2P1-201ENST00000399358 958 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 RNA5SP36-201ENST00000410197 133 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AL356095.1-201ENST00000417217 199 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 GNG5P5-201ENST00000420444 220 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 HLA-N-201ENST00000437516 135 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 RPS27AP13-201ENST00000498403 237 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AC111000.5-201ENST00000506559 1178 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AL592156.1-201ENST00000508758 304 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 PPBPP1-201ENST00000510807 373 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 NDUFB4P12-201ENST00000513465 390 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 SNORA67.7-201ENST00000516664 135 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AP001804.2-201ENST00000533932 910 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 AP005262.1-201ENST00000582646 997 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 AC138907.10-201ENST00000623708 983 ntBASIC5.92□□□□□ -1.46
CCDC7Q96M83 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC7Q96M83 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC7Q96M83 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 LINC01881-201ENST00000416103 412 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 DPPA2P2-201ENST00000418220 897 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 AL512326.1-201ENST00000443050 721 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 RPS20P4-201ENST00000461659 355 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 NPM1P29-201ENST00000483112 803 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 AL121834.1-201ENST00000572284 509 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 MIR3158-1-201ENST00000583596 81 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 FAM27D1-201ENST00000612308 341 ntBASIC5.91□□□□□ -1.46
CCDC7Q96M83 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC7Q96M83 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC7Q96M83 AP000542.2-201ENST00000623199 6179 ntBASIC5.9□□□□□ -1.46
CCDC7Q96M83 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC7Q96M83 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC7Q96M83 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
CCDC7Q96M83 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC7Q96M83 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
CCDC7Q96M83 MTCO1P46-201ENST00000451639 1491 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC7Q96M83 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC7Q96M83 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC7Q96M83 AL035696.2-201ENST00000407941 709 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 RPL23AP81-201ENST00000455252 467 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC7Q96M83 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 RN7SL542P-201ENST00000467147 294 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 IFITM8P-201ENST00000522529 394 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 AC010547.7-201ENST00000570323 333 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 AL161729.3-201ENST00000603533 673 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 AC055839.1-201ENST00000634467 498 ntBASIC5.9□□□□□ -1.47
CCDC7Q96M83 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC7Q96M83 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CCDC7Q96M83 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC7Q96M83 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC7Q96M83 MAPK10-320ENST00000641462 6696 ntBASIC5.89□□□□□ -1.47
CCDC7Q96M83 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC7Q96M83 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC7Q96M83 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC7Q96M83 RNA5SP283-201ENST00000365604 119 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms