Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.86□□□□□ -1.47
USP47Q96K76 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.86□□□□□ -1.47
USP47Q96K76 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.86□□□□□ -1.47
USP47Q96K76 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 RNU11-4P-201ENST00000391149 133 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 RNA5SP146-201ENST00000410743 123 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.86□□□□□ -1.47
USP47Q96K76 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.86□□□□□ -1.47
USP47Q96K76 CYP4F29P-201ENST00000420685 446 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.86□□□□□ -1.47
USP47Q96K76 DYNLL1P7-201ENST00000429273 258 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 RAD23BP3-201ENST00000454157 1152 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
USP47Q96K76 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.86□□□□□ -1.47
USP47Q96K76 KRT19P6-201ENST00000510983 209 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.86□□□□□ -1.47
USP47Q96K76 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.86□□□□□ -1.47
USP47Q96K76 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.86□□□□□ -1.47
USP47Q96K76 AC114878.2-201ENST00000604863 1251 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
USP47Q96K76 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP47Q96K76 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 Z95327.2-201ENST00000414579 1873 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.85□□□□□ -1.47
USP47Q96K76 VDAC2P1-201ENST00000399358 958 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 AL356095.1-201ENST00000417217 199 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 UBE2V2P4-201ENST00000447495 259 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 RPL36AP13-201ENST00000457490 317 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.85□□□□□ -1.47
USP47Q96K76 ARL4AP1-201ENST00000503220 705 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 SNORA67.7-201ENST00000516664 135 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 OR5D2P-201ENST00000524390 911 ntBASIC5.85□□□□□ -1.47
USP47Q96K76 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.85□□□□□ -1.47
USP47Q96K76 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.85□□□□□ -1.47
USP47Q96K76 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.85□□□□□ -1.47
USP47Q96K76 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.85□□□□□ -1.47
USP47Q96K76 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.85□□□□□ -1.47
USP47Q96K76 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.85□□□□□ -1.47
USP47Q96K76 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
USP47Q96K76 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.85□□□□□ -1.47
USP47Q96K76 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP47Q96K76 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP47Q96K76 RNU6-316P-201ENST00000391027 107 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.84□□□□□ -1.47
USP47Q96K76 TPT1P2-201ENST00000413105 503 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 AC006011.1-201ENST00000442758 349 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.84□□□□□ -1.47
USP47Q96K76 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.84□□□□□ -1.47
USP47Q96K76 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP47Q96K76 AGGF1P6-201ENST00000569213 976 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 MIR5684-201ENST00000585074 65 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.84□□□□□ -1.47
USP47Q96K76 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.84□□□□□ -1.47
USP47Q96K76 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
USP47Q96K76 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.84□□□□□ -1.47
USP47Q96K76 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP47Q96K76 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP47Q96K76 AC139713.2-215ENST00000641428 5037 ntBASIC5.84□□□□□ -1.47
USP47Q96K76 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP47Q96K76 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
USP47Q96K76 ERCC6-202ENST00000374127 1782 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 MIR372-201ENST00000362225 67 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.83□□□□□ -1.48
USP47Q96K76 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
USP47Q96K76 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
USP47Q96K76 ATP5F1P3-201ENST00000397213 657 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 EIF4A1P3-201ENST00000411521 244 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 RAB9AP4-201ENST00000415230 609 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP47Q96K76 YY1P1-201ENST00000427625 668 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 AC006946.1-201ENST00000429106 328 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 snoU13.22-201ENST00000459428 104 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 RN7SL542P-201ENST00000467147 294 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 TCP11X3P-202ENST00000514289 1254 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 AC023632.4-201ENST00000517783 191 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.83□□□□□ -1.48
USP47Q96K76 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 AC063950.1-201ENST00000552036 308 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 MTND6P33-201ENST00000571794 183 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 MIR3158-1-201ENST00000583596 81 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.83□□□□□ -1.48
USP47Q96K76 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.83□□□□□ -1.48
USP47Q96K76 AC006363.1-201ENST00000603806 463 ntBASIC5.83□□□□□ -1.48
USP47Q96K76 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.83□□□□□ -1.48
USP47Q96K76 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms