Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC020656.2-201ENST00000613291 5309 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 DUXAP2-201ENST00000519198 589 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC005000.2-201ENST00000605468 310 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC024023.1-201ENST00000624530 922 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL034408.1-202ENST00000636088 415 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC074029.4-201ENST00000624796 1859 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL022393.1-201ENST00000625142 1677 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 ATP5F1P4-201ENST00000397288 746 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 RPL35AP21-201ENST00000437667 333 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 GTF3AP5-201ENST00000442645 697 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 SETP6-201ENST00000479329 568 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 RN7SL293P-201ENST00000481765 281 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC005034.4-201ENST00000603612 899 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC079880.2-201ENST00000603790 1213 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL672167.1-203ENST00000641299 2975 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 OR52E6-202ENST00000379946 954 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC007066.1-201ENST00000392902 381 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 RN7SKP156-201ENST00000410308 342 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 EIF4HP2-201ENST00000424380 563 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC091286.1-201ENST00000431233 461 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 CAB39P1-201ENST00000502277 460 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AC120057.2-201ENST00000571520 271 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 OOSP1P2-201ENST00000579644 351 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC092647.1-201ENST00000420654 287 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 CYCSP24-201ENST00000445119 316 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AL606490.9-201ENST00000603331 271 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 BOLA3P4-201ENST00000418151 400 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 CEACAMP1-201ENST00000434624 1035 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 RNU1-95P-201ENST00000516357 160 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 RNU1-128P-201ENST00000516704 160 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 RPL21P12-201ENST00000559810 515 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms