Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.53□□□□□ -1.68
UBA3Q8TBC4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
UBA3Q8TBC4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
UBA3Q8TBC4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 RNU1-14P-201ENST00000362759 152 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AL161631.1-201ENST00000417933 486 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC079804.1-201ENST00000461922 436 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 NDUFA5P9-201ENST00000472609 340 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 RPL35P6-201ENST00000490024 372 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC026979.1-201ENST00000492525 396 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC111000.5-201ENST00000506559 1178 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC008958.1-201ENST00000511047 682 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC006064.5-201ENST00000541782 248 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AC027176.2-201ENST00000559166 746 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 MLECP1-201ENST00000615893 709 ntBASIC4.52□□□□□ -1.69
UBA3Q8TBC4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
UBA3Q8TBC4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AL356489.2-201ENST00000566968 3528 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 RPL23AP26-201ENST00000412728 464 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC098592.2-201ENST00000413158 265 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 SKP1P3-201ENST00000429280 487 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 ACTR3P2-201ENST00000439585 1257 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 RPL23AP81-201ENST00000455252 467 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 RPL7AP52-201ENST00000458096 790 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 PSMC1P13-201ENST00000458195 985 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC109327.1-201ENST00000471666 403 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 TRBV8-1-201ENST00000481590 279 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC104164.2-201ENST00000496953 495 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC083829.1-201ENST00000503756 657 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 PARP4P3-201ENST00000510265 317 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 MTND2P13-201ENST00000577438 1039 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC023575.1-201ENST00000580510 358 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 ELOCP28-201ENST00000590044 317 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC005229.3-201ENST00000603438 323 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 HSPD1P11-201ENST00000508643 1702 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 DDX18P4-201ENST00000511690 1966 ntBASIC4.51□□□□□ -1.69
UBA3Q8TBC4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA3Q8TBC4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 AC091046.3-201ENST00000631455 1574 ntBASIC4.5□□□□□ -1.69
UBA3Q8TBC4 RNA5SP443-201ENST00000363083 132 ntBASIC4.5□□□□□ -1.69
UBA3Q8TBC4 RNA5SP366-201ENST00000365454 123 ntBASIC4.5□□□□□ -1.69
UBA3Q8TBC4 AC093719.1-202ENST00000392735 373 ntBASIC4.5□□□□□ -1.69
UBA3Q8TBC4 VN1R31P-201ENST00000417498 730 ntBASIC4.5□□□□□ -1.69
UBA3Q8TBC4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.5□□□□□ -1.69
UBA3Q8TBC4 RPS20P1-201ENST00000434853 354 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms