Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTL9Q8NET4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RTL9Q8NET4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 MIR554-201ENST00000384874 96 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 SNORD96B-201ENST00000386148 79 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 RPL21P65-201ENST00000406094 466 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 CYP4F29P-201ENST00000420685 446 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 AC006946.1-201ENST00000429106 328 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 RPS26P24-201ENST00000497656 331 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 DPRXP4-201ENST00000578053 568 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 BNIP3P41-202ENST00000616656 861 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.27□□□□□ -1.57
RTL9Q8NET4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL9Q8NET4 RLIMP1-201ENST00000339626 1680 ntBASIC5.27□□□□□ -1.57
RTL9Q8NET4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTL9Q8NET4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTL9Q8NET4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTL9Q8NET4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTL9Q8NET4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 RNA5SP513-201ENST00000364648 118 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 MT-RNR1-201ENST00000389680 954 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 CEACAMP1-201ENST00000434624 1035 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 MTND4LP31-201ENST00000514859 294 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 DYNLL1P4-201ENST00000549314 266 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 SETP1-201ENST00000556014 845 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AL390334.1-201ENST00000556395 450 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 MIR4286-201ENST00000580651 93 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC039056.2-201ENST00000622261 511 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC005086.4-201ENST00000623065 213 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 AC010608.2-201ENST00000624830 470 ntBASIC5.26□□□□□ -1.57
RTL9Q8NET4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RTL9Q8NET4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 CASC19-204ENST00000641001 2055 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 AC126323.6-202ENST00000568092 3511 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 SNORA71.3-201ENST00000362582 128 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 RNA5SP296-201ENST00000410523 111 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 MIR1911-201ENST00000410783 80 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 RPS29P7-201ENST00000439662 171 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 RPL7P22-201ENST00000466005 733 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 FTH1P21-201ENST00000512179 511 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 AC053481.4-201ENST00000583164 216 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.25□□□□□ -1.57
RTL9Q8NET4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTL9Q8NET4 PCAT14-202ENST00000627127 3935 ntBASIC5.25□□□□□ -1.57
RTL9Q8NET4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 MIR208A-201ENST00000362287 71 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 TRAV35-201ENST00000390462 330 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC002524.1-201ENST00000411687 547 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AL445213.1-201ENST00000412589 747 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms